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The map label for this gene is mmgC [H]

Identifier: 209548161

GI number: 209548161

Start: 576308

End: 578086

Strand: Direct

Name: mmgC [H]

Synonym: Rleg2_0555

Alternate gene names: 209548161

Gene position: 576308-578086 (Clockwise)

Preceding gene: 209548156

Following gene: 209548162

Centisome position: 12.7

GC content: 66.27

Gene sequence:

>1779_bases
ATGTATAAGGCGCCCGTCGAGGAAATCGCGTTCACGTTGAAGCATGTAGCCGGCATGGACGACGCGATTTCAAAAGGGCT
TCTCGGCGATCTCAGCGAAGATCTGGTCGATGCCGTGCTCTCCGAGGCGGGACGTTTTGCCACAGAGGAAGTGGCGCCGC
TCGCCGACATCGGCGACCGCCAGGGCGCCCGTCTGGAAGGCGGCGAGGTCAGGCTGCCGGACGGCTGGCGCGATCTCTAC
CGCAGCTGGATCGCCGGCGGCTGGAATGGTCTGACGGCGCCCGAAGCCTTTGGCGGCCAGGCCCTGCCGCATATGCTGAA
CGTCGCGGCGCTGGAAATGTGGAATTCCGGCTCCATGGCCTTCGCGCTCGCCCCCACGCTGACGATGGGCGCCATCGAGG
CGGTCAGCACCCATGGCAGCGCCGCGCTGAAGGAAAAATATCTGGAGAAGATGGTCTCAGGCGAATGGACCGGCACCATG
AACCTGACGGAACCGCATGCCGGCTCCGATCTCGGCGTGCTCAAGGCCCGCGCCGAGCGCCGCGCCGACGGCAGCTATCG
CATCTTCGGCCAGAAGATCTTCATCACCTGGGGTGAGCATGACGCGGCCGACAACATCATCCATCTCGTGCTCGCCCGCC
TGCCGGATGCGCCGGCCGGCACCCGCGGCATCTCGCTCTTCCTGGTGCCGAAATTCCTGGTGAACGACGACGGCTCGCTG
GGTGCCCGCAACGATCTGTTCTGCCACTCGTTGGAGCACAAGCTCGGCATTCACGGCTCGCCGACCTGCACGATGATCTA
TGGCGACGGCCGGTTCGGCGACGAAAAGGGGGCTGTGGGCTGGCTGGTTGGCGAGGAGAACAAGGGCTTGGCCTGCATGT
TCACGATGATGAACAATGCCCGCCTGGCCGTCGGCATGCAGGGCGTGGCGATCGCCGAGGCCGCCACCCAGAAGGCTGTC
GCCTATGCCAAGGAACGCACCCAGGGCAGGGCGCCCGGCTGGAGCGGGCCCGGCATGAGCCCGATCGTCGAACATCCCGA
TGTCGCCCGCATGCTTCTTACCATGAAGGCGCTGACGCAAGGGGCGCGCGCCATTTCCTATGCCTGCGCCCACGCGATCG
ACATGTCCCACCGGGCCGGCGACGTCAGCCGCCACTGGCAGGAGCGTGCCGCGCTTTTGACCCCGATCGCCAAATCCTTT
TCGACCGATGCCGGCGTCGACGTCGCCTCGCTCGGCATTCAGGTGCATGGCGGCATGGGCTTCATCGAGGAGACCGGTGC
GGCGCGTTATCTGCGCGACGCCCGCATCGCGCCGATCTACGAGGGCACCAATGGCATCCAGGCGATCGACCTCGTCACCC
GCAAGCTGCCGCTTTCCGGCGGCGAGCAGGTGAAGGGCTTCATCGCCGAGCTGAAGGAGATTGCCGAGCGCGTCCGCCGC
TCCAATCTCGATGGTTTCGCCGAGACATCAGTCAGGCTCGACGCTGCGATTTCAGATCTCGAAGCGGCGACCGACTGGCT
CACGAAGACGCTTGCCGACGGCAAGGCGGCCGAGGCGCTTTCGGGCGCGACACCCTATCAGCGCCTGTTCGGCCTCGTGC
TCACCGGCTGCTATCTCGCCAAGGGCGCTCTCGCCGAAAGCGGCGATGGCAGGGGCGCGGGCCGCATCGTGCTCTGCCGC
TTTGCCGCCGAAAACCTGCTCGCCGAGACCGCAGCCCTTCGCGACCGCGTCGTCAATGGCGCGGCAAGCCTTGCCGCCGC
CCGCATCCTGCTTGCCTGA

Upstream 100 bases:

>100_bases
GCCGGCCGGCAAATCGAAATTGACGTTTACGTAAAAATCAATTAGCCCTTTGCCCCGGAGGGCTTTGCGCGGGATGCAGG
CCGGTCCTGCGGAGGATACA

Downstream 100 bases:

>100_bases
GGCGACCCCATGACCTCTGAGGACATCCAATGACCGATCACATCATCGTCGAGCAGCCTTCCGCCCATCCCGGCGTCCAG
CTCATCCGCTTCAACCGGCC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MYKAPVEEIAFTLKHVAGMDDAISKGLLGDLSEDLVDAVLSEAGRFATEEVAPLADIGDRQGARLEGGEVRLPDGWRDLY
RSWIAGGWNGLTAPEAFGGQALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGTM
NLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSL
GARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAATQKAV
AYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHAIDMSHRAGDVSRHWQERAALLTPIAKSF
STDAGVDVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRR
SNLDGFAETSVRLDAAISDLEAATDWLTKTLADGKAAEALSGATPYQRLFGLVLTGCYLAKGALAESGDGRGAGRIVLCR
FAAENLLAETAALRDRVVNGAASLAAARILLA

Sequences:

>Translated_592_residues
MYKAPVEEIAFTLKHVAGMDDAISKGLLGDLSEDLVDAVLSEAGRFATEEVAPLADIGDRQGARLEGGEVRLPDGWRDLY
RSWIAGGWNGLTAPEAFGGQALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGTM
NLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSL
GARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAATQKAV
AYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHAIDMSHRAGDVSRHWQERAALLTPIAKSF
STDAGVDVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRR
SNLDGFAETSVRLDAAISDLEAATDWLTKTLADGKAAEALSGATPYQRLFGLVLTGCYLAKGALAESGDGRGAGRIVLCR
FAAENLLAETAALRDRVVNGAASLAAARILLA
>Mature_592_residues
MYKAPVEEIAFTLKHVAGMDDAISKGLLGDLSEDLVDAVLSEAGRFATEEVAPLADIGDRQGARLEGGEVRLPDGWRDLY
RSWIAGGWNGLTAPEAFGGQALPHMLNVAALEMWNSGSMAFALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGTM
NLTEPHAGSDLGVLKARAERRADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSL
GARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNARLAVGMQGVAIAEAATQKAV
AYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQGARAISYACAHAIDMSHRAGDVSRHWQERAALLTPIAKSF
STDAGVDVASLGIQVHGGMGFIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRR
SNLDGFAETSVRLDAAISDLEAATDWLTKTLADGKAAEALSGATPYQRLFGLVLTGCYLAKGALAESGDGRGAGRIVLCR
FAAENLLAETAALRDRVVNGAASLAAARILLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=433, Percent_Identity=27.7136258660508, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI226958414, Length=362, Percent_Identity=28.1767955801105, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4557233, Length=366, Percent_Identity=28.6885245901639, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4501859, Length=410, Percent_Identity=24.8780487804878, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI4501857, Length=345, Percent_Identity=27.2463768115942, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI21361497, Length=416, Percent_Identity=26.4423076923077, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI4557235, Length=392, Percent_Identity=28.8265306122449, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI76496475, Length=392, Percent_Identity=28.8265306122449, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI187960098, Length=417, Percent_Identity=27.5779376498801, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI4557231, Length=417, Percent_Identity=27.5779376498801, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI7656849, Length=380, Percent_Identity=24.2105263157895, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI87082384, Length=440, Percent_Identity=28.4090909090909, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI87081958, Length=374, Percent_Identity=28.8770053475936, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538396, Length=412, Percent_Identity=29.126213592233, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI86563381, Length=483, Percent_Identity=24.8447204968944, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=483, Percent_Identity=24.8447204968944, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=429, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=361, Percent_Identity=28.5318559556787, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=442, Percent_Identity=27.6018099547511, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17534899, Length=417, Percent_Identity=27.3381294964029, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=422, Percent_Identity=25.8293838862559, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=437, Percent_Identity=25.1716247139588, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=364, Percent_Identity=25, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=365, Percent_Identity=25.7534246575342, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17551932, Length=364, Percent_Identity=23.9010989010989, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71990804, Length=243, Percent_Identity=27.1604938271605, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355753, Length=425, Percent_Identity=28, Blast_Score=116, Evalue=5e-26,
Organism=Drosophila melanogaster, GI21356377, Length=358, Percent_Identity=28.2122905027933, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24646207, Length=451, Percent_Identity=26.1640798226164, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281363737, Length=370, Percent_Identity=25.4054054054054, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24660351, Length=438, Percent_Identity=27.8538812785388, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24666513, Length=370, Percent_Identity=27.027027027027, Blast_Score=94, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 62809; Mature: 62809

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKAPVEEIAFTLKHVAGMDDAISKGLLGDLSEDLVDAVLSEAGRFATEEVAPLADIGDR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC
QGARLEGGEVRLPDGWRDLYRSWIAGGWNGLTAPEAFGGQALPHMLNVAALEMWNSGSMA
CCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCEE
FALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGTMNLTEPHAGSDLGVLKARAER
EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH
RADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSL
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCCCC
GARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNA
CCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
RLAVGMQGVAIAEAATQKAVAYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQ
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GARAISYACAHAIDMSHRAGDVSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHCCEEEECCCC
FIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRR
CHHHCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SNLDGFAETSVRLDAAISDLEAATDWLTKTLADGKAAEALSGATPYQRLFGLVLTGCYLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KGALAESGDGRGAGRIVLCRFAAENLLAETAALRDRVVNGAASLAAARILLA
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKAPVEEIAFTLKHVAGMDDAISKGLLGDLSEDLVDAVLSEAGRFATEEVAPLADIGDR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHCCCC
QGARLEGGEVRLPDGWRDLYRSWIAGGWNGLTAPEAFGGQALPHMLNVAALEMWNSGSMA
CCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCEE
FALAPTLTMGAIEAVSTHGSAALKEKYLEKMVSGEWTGTMNLTEPHAGSDLGVLKARAER
EEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHH
RADGSYRIFGQKIFITWGEHDAADNIIHLVLARLPDAPAGTRGISLFLVPKFLVNDDGSL
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHEECCCCCC
GARNDLFCHSLEHKLGIHGSPTCTMIYGDGRFGDEKGAVGWLVGEENKGLACMFTMMNNA
CCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
RLAVGMQGVAIAEAATQKAVAYAKERTQGRAPGWSGPGMSPIVEHPDVARMLLTMKALTQ
EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
GARAISYACAHAIDMSHRAGDVSRHWQERAALLTPIAKSFSTDAGVDVASLGIQVHGGMG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHCCEEEECCCC
FIEETGAARYLRDARIAPIYEGTNGIQAIDLVTRKLPLSGGEQVKGFIAELKEIAERVRR
CHHHCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
SNLDGFAETSVRLDAAISDLEAATDWLTKTLADGKAAEALSGATPYQRLFGLVLTGCYLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KGALAESGDGRGAGRIVLCRFAAENLLAETAALRDRVVNGAASLAAARILLA
CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]