| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is gpmB [H]
Identifier: 209548147
GI number: 209548147
Start: 560433
End: 561014
Strand: Direct
Name: gpmB [H]
Synonym: Rleg2_0541
Alternate gene names: 209548147
Gene position: 560433-561014 (Clockwise)
Preceding gene: 209548146
Following gene: 209548148
Centisome position: 12.35
GC content: 65.98
Gene sequence:
>582_bases ATGAGCAGTGCGTTTCCCGAGATCTACCTGGTTCGGCACGGCGAAACCGAATGGAGCCTGTCCGGGCGCCATACCGGCCG CAGCGATATTCCGCTGACGGGAAATGGCGAGGCCGCCGCCAGCAAGCTCGCCGATCGGCTTTCAGGTCTTTCTTTCTCGG CCGTCTGGTCGAGCCCGTCGGCGCGGGCCCGCAAGACCTGCGCGCTCGCCGGCTTCGGAGCGGGCGCGGTGATCCGCGAC GATCTCGCCGAATGGGATTATGGCGCCTATGAGGGCGTCACCACCAAGGCGATCCTGGCTGAGCGCCCGGGATGGCAGCT CTTTCGCGACGGCTGCCCGAACGGCGAAACGTCCGCCGATGTCGGCGCCCGCGCCGACGCCATCATCCACGCGCTTCGCG AGGCGGCGGGCACAATCCTGATTTTCTCCAGCTCGCATTTCCTGCGTGTACTCGCCGCCCGCTGGCTCGGCCTGCCGCCC GAAGGCGGCGCGCATTTCGTGCTCGATACCGCTTCTATCAGCGTGCTTGGTTATGAACACGATCTGACGGAGCCGGTCAT TCGCCGGTGGAACCAGAGATAG
Upstream 100 bases:
>100_bases GTAACGAGGCCAGGCTGAAGGAATTCGAGGCGAGGCGCGCACCGCTGGAAAAGGTGACGTTCTGAGCGGCAGCAGCCGGA CGTGATAAAAGGACATGCCG
Downstream 100 bases:
>100_bases GGCATCGGGGGGTGGGTTTGCGGAATTCGATAGCAGATGCCATCAGCCGTGTGGCACCACTTTCATTAGCTCCCTTTGTT CCCCGTGGTTAACATTGGGG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSFSAVWSSPSARARKTCALAGFGAGAVIRD DLAEWDYGAYEGVTTKAILAERPGWQLFRDGCPNGETSADVGARADAIIHALREAAGTILIFSSSHFLRVLAARWLGLPP EGGAHFVLDTASISVLGYEHDLTEPVIRRWNQR
Sequences:
>Translated_193_residues MSSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSFSAVWSSPSARARKTCALAGFGAGAVIRD DLAEWDYGAYEGVTTKAILAERPGWQLFRDGCPNGETSADVGARADAIIHALREAAGTILIFSSSHFLRVLAARWLGLPP EGGAHFVLDTASISVLGYEHDLTEPVIRRWNQR >Mature_192_residues SSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSFSAVWSSPSARARKTCALAGFGAGAVIRDD LAEWDYGAYEGVTTKAILAERPGWQLFRDGCPNGETSADVGARADAIIHALREAAGTILIFSSSHFLRVLAARWLGLPPE GGAHFVLDTASISVLGYEHDLTEPVIRRWNQR
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=186, Percent_Identity=32.258064516129, Blast_Score=80, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322896, Length=221, Percent_Identity=33.9366515837104, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 20750; Mature: 20619
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSFSAVWSSPS CCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC ARARKTCALAGFGAGAVIRDDLAEWDYGAYEGVTTKAILAERPGWQLFRDGCPNGETSAD CHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC VGARADAIIHALREAAGTILIFSSSHFLRVLAARWLGLPPEGGAHFVLDTASISVLGYEH CCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCC DLTEPVIRRWNQR CCHHHHHHHCCCC >Mature Secondary Structure SSAFPEIYLVRHGETEWSLSGRHTGRSDIPLTGNGEAAASKLADRLSGLSFSAVWSSPS CCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCC ARARKTCALAGFGAGAVIRDDLAEWDYGAYEGVTTKAILAERPGWQLFRDGCPNGETSAD CHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC VGARADAIIHALREAAGTILIFSSSHFLRVLAARWLGLPPEGGAHFVLDTASISVLGYEH CCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEECCC DLTEPVIRRWNQR CCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA