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The map label for this gene is glyQ

Identifier: 209548135

GI number: 209548135

Start: 542722

End: 543657

Strand: Direct

Name: glyQ

Synonym: Rleg2_0529

Alternate gene names: 209548135

Gene position: 542722-543657 (Clockwise)

Preceding gene: 209548134

Following gene: 209548136

Centisome position: 11.96

GC content: 63.25

Gene sequence:

>936_bases
ATGAACCCGAAGCGCTCCTTCCAGGCGCTGATCCTGACCCTGCATAGCTACTGGGCGGACAAGGGTTGCGCGGTGCTGCA
GCCTTACGACATGGAAGTCGGCGCCGGCACCTTTCACCCGGCCACGACGCTGCGTGCGCTCGGCCCCAAGCCGTGGAAGG
CTGCCTATGTTCAGCCGTCGCGGCGCCCGTCCGATGGCCGCTACGGCGAGAACCCGAACCGCCTGCAGCATTATTACCAG
TACCAGGTGATCCTGAAGCCGAACCCGCCCAATCTGCAGGAGCTCTATCTCGGCTCGCTGGCGGCGATCGGCCTCGATCC
GCTGCTGCACGACATCCGTTTCGTCGAGGACGATTGGGAAAGCCCGACGCTGGGCGCCTGGGGCCTCGGCTGGGAATGCT
GGTGCGATGGCATGGAAGTCTCGCAGTTCACCTATTTCCAGCAGGTCTGCGGCATCGAATGCGCGCCGGTCGCCGGCGAG
CTGACCTATGGCCTCGAACGCCTCGCCATGTATGTCCAGGGCGTCGACAATGTCTACGATCTGAACTTCAACGGCCGCGA
AGGCGACGAGAAGATCAGCTATGGCGACGTCTTCCTGCAGGCCGAGCAGGAATATTCGCGCCATAATTTCGAATTCGCCA
ACACCGAGATGCTGCATCGCCACTTCGTCGATGCCGAGAAGGAATGCCGGGCGCTGCTCGACGCCGGCGCGCCTGCCGAC
AACGCCAATCAACGCCTGCACAAATGCGTCTTCCCGGCCTATGATCAATGCATCAAGGCCAGCCACGTCTTCAACCTGCT
CGACGCCCGCGGCGTCATCTCGGTCACCGAACGCCAGAGCTATATCCTGCGCGTGCGCACGCTGGCCAAGGCCTGCGGCG
AAGCCTTCCTGCTGACCGACGCCGGCGGCGTCAATCTGTCGAAAGAGGCGGCGTAA

Upstream 100 bases:

>100_bases
CCCCCGCAAAACCCTTGACCCCCGCCGCCCTCCATGGCACCTGTCGCCCCGATAATCCCCATGCAATCGGTGCCGTGTCA
TGTCAGCTATCCCAGACCAT

Downstream 100 bases:

>100_bases
AAGCCGCCTCGAAAAATTTCGCTGCTTCCGAGACCGTGCTTCTTTTGCGGGAACCCCTCGACCACTATCTTGTCGATGTT
TCGATCACGTATAGATTCGG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNPKRSFQALILTLHSYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPSDGRYGENPNRLQHYYQ
YQVILKPNPPNLQELYLGSLAAIGLDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGE
LTYGLERLAMYVQGVDNVYDLNFNGREGDEKISYGDVFLQAEQEYSRHNFEFANTEMLHRHFVDAEKECRALLDAGAPAD
NANQRLHKCVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRTLAKACGEAFLLTDAGGVNLSKEAA

Sequences:

>Translated_311_residues
MNPKRSFQALILTLHSYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPSDGRYGENPNRLQHYYQ
YQVILKPNPPNLQELYLGSLAAIGLDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGE
LTYGLERLAMYVQGVDNVYDLNFNGREGDEKISYGDVFLQAEQEYSRHNFEFANTEMLHRHFVDAEKECRALLDAGAPAD
NANQRLHKCVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRTLAKACGEAFLLTDAGGVNLSKEAA
>Mature_311_residues
MNPKRSFQALILTLHSYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPSRRPSDGRYGENPNRLQHYYQ
YQVILKPNPPNLQELYLGSLAAIGLDPLLHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGE
LTYGLERLAMYVQGVDNVYDLNFNGREGDEKISYGDVFLQAEQEYSRHNFEFANTEMLHRHFVDAEKECRALLDAGAPAD
NANQRLHKCVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRTLAKACGEAFLLTDAGGVNLSKEAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=293, Percent_Identity=64.5051194539249, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_RHILW (B5ZS33)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002280052.1
- ProteinModelPortal:   B5ZS33
- SMR:   B5ZS33
- GeneID:   6979245
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_0529
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34981; Mature: 34981

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPKRSFQALILTLHSYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPS
CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
RRPSDGRYGENPNRLQHYYQYQVILKPNPPNLQELYLGSLAAIGLDPLLHDIRFVEDDWE
CCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGELTYGLERLAMYVQGVDNVYD
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LNFNGREGDEKISYGDVFLQAEQEYSRHNFEFANTEMLHRHFVDAEKECRALLDAGAPAD
CCCCCCCCCCCEEECCEEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCC
NANQRLHKCVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRTLAKACGEAFLLTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEC
AGGVNLSKEAA
CCCCCCCCCCC
>Mature Secondary Structure
MNPKRSFQALILTLHSYWADKGCAVLQPYDMEVGAGTFHPATTLRALGPKPWKAAYVQPS
CCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCC
RRPSDGRYGENPNRLQHYYQYQVILKPNPPNLQELYLGSLAAIGLDPLLHDIRFVEDDWE
CCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SPTLGAWGLGWECWCDGMEVSQFTYFQQVCGIECAPVAGELTYGLERLAMYVQGVDNVYD
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
LNFNGREGDEKISYGDVFLQAEQEYSRHNFEFANTEMLHRHFVDAEKECRALLDAGAPAD
CCCCCCCCCCCEEECCEEEEEHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCC
NANQRLHKCVFPAYDQCIKASHVFNLLDARGVISVTERQSYILRVRTLAKACGEAFLLTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEC
AGGVNLSKEAA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA