| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ribF [H]
Identifier: 209548080
GI number: 209548080
Start: 483160
End: 484143
Strand: Direct
Name: ribF [H]
Synonym: Rleg2_0473
Alternate gene names: 209548080
Gene position: 483160-484143 (Clockwise)
Preceding gene: 209548079
Following gene: 209548081
Centisome position: 10.65
GC content: 63.82
Gene sequence:
>984_bases ATGACAGTCTTCCACCGCAATGAAACCCGGGAACCTTTGCCCGCCCATCTCAAGGGCGGCGTCATTGCCATAGGCAATTT CGACGGCGTGCACCGCGGCCACCAGTCGGTGCTCAACCGCGCGCTCGAAATCTCCAAGGCGCGCGGCATCCCGGCTTTGG TGCTGACATTCGAGCCGCATCCGCGCACCGTCTTCCGGCCCGAGACCCCGGTCTTCCGCCTGACGCCCGCGCCACTCAAG GCCCGCATCCTGGAAACGCTGGGCTTCAATGCGGTGATCGAATATCCCTTCGATTACGAGTTCTCGCAGCGCTCGGCCGA TGATTTCATCCATTCGATCCTCAAGGATTGGCTCGGCGCCTCGGAAGTCGTCACCGGTTTCGATTTCCATTTCGGCCGCG GCCGCGAGGGCGGTCCGGCCTTCCTGATGAATGCCGGCCAGACCTATGGCTTCGGCGTCACCCTGATCGATGCCTTCCGC GATGAAAACGCCGATGTCGCCTCGTCGAGCCATATCCGCGCGCTGCTGAAAGAAGGCAGCGTCAGCGAAGTTGCCGGCAT GCTGGGCTACCGCTATACGGTCGAGGCCGAGGTGATCGACGGCGAAAAGCTCGGACGGCAGCTCGGTTTTCCCACCGCCA ACATGCGCCTTCCGCCGGAGGTTGAACTTGCCGCCGGCATCTACGCCGTCCGCTTCCGCCGCCAGGACGGCACCCTCCAC GACGCCGTCGCGAGCTACGGCCGCCGCCCGACGGTGACCGAAAACGGTGCGCCGCTGCTCGAAACCTATCTATTCGACTT CAGCGGCGATCTCTACGGCCAGCGCTGCGCCGTCTCCTTCTTCGGCTATCTGAGACCCGAACTGAAATTCGACGGCCTCG ATCCGCTGGTCGCCCAGATCAAGCGCGACGAGGAAGAGGCGAGGGCGCTGCTGTCGGGCGTCCAGCCCTTGGGCGAACTC GACCGGAAGCTCTGCTTTTCCTGA
Upstream 100 bases:
>100_bases ACGAGGCGATCCTCAACGCCTATCTCGATCGGGAAAACGCCGCGCCGAAGTGGTGGATGCCCCGCCTTGCATAGAGATTT GCATAAAGAGAAGCCAGCCG
Downstream 100 bases:
>100_bases GGCTGCGCGGGGTACGGGATTTTTCGATCGCAAACAAATTTTCGCTCGCGACGGGGGATCGCATAGCGCGAATTCTGCTC TTCCTTTTCCAGGCAAAAAC
Product: bifunctional riboflavin kinase/FMN adenylyltransferase
Products: NA
Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLK ARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFR DENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGEL DRKLCFS
Sequences:
>Translated_327_residues MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLK ARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFR DENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGEL DRKLCFS >Mature_326_residues TVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLKA RILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRD ENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLHD AVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGELD RKLCFS
Specific function: Unknown
COG id: COG0196
COG function: function code H; FAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribF family [H]
Homologues:
Organism=Escherichia coli, GI1786208, Length=299, Percent_Identity=36.7892976588629, Blast_Score=179, Evalue=2e-46, Organism=Drosophila melanogaster, GI24644927, Length=111, Percent_Identity=38.7387387387387, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR015864 - InterPro: IPR015865 - InterPro: IPR002606 - InterPro: IPR014729 [H]
Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]
EC number: =2.7.1.26; =2.7.7.2 [H]
Molecular weight: Translated: 36250; Mature: 36118
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH CCEECCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA CCCEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCH SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCC VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH HHHHHHHHCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEEEECCCCCHH DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH KRDEEEARALLSGVQPLGELDRKLCFS HCCHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure TVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH CEECCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA CCCEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCH SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCC VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH HHHHHHHHCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEEEECCCCCHH DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH KRDEEEARALLSGVQPLGELDRKLCFS HCCHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]