Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 209548080

GI number: 209548080

Start: 483160

End: 484143

Strand: Direct

Name: ribF [H]

Synonym: Rleg2_0473

Alternate gene names: 209548080

Gene position: 483160-484143 (Clockwise)

Preceding gene: 209548079

Following gene: 209548081

Centisome position: 10.65

GC content: 63.82

Gene sequence:

>984_bases
ATGACAGTCTTCCACCGCAATGAAACCCGGGAACCTTTGCCCGCCCATCTCAAGGGCGGCGTCATTGCCATAGGCAATTT
CGACGGCGTGCACCGCGGCCACCAGTCGGTGCTCAACCGCGCGCTCGAAATCTCCAAGGCGCGCGGCATCCCGGCTTTGG
TGCTGACATTCGAGCCGCATCCGCGCACCGTCTTCCGGCCCGAGACCCCGGTCTTCCGCCTGACGCCCGCGCCACTCAAG
GCCCGCATCCTGGAAACGCTGGGCTTCAATGCGGTGATCGAATATCCCTTCGATTACGAGTTCTCGCAGCGCTCGGCCGA
TGATTTCATCCATTCGATCCTCAAGGATTGGCTCGGCGCCTCGGAAGTCGTCACCGGTTTCGATTTCCATTTCGGCCGCG
GCCGCGAGGGCGGTCCGGCCTTCCTGATGAATGCCGGCCAGACCTATGGCTTCGGCGTCACCCTGATCGATGCCTTCCGC
GATGAAAACGCCGATGTCGCCTCGTCGAGCCATATCCGCGCGCTGCTGAAAGAAGGCAGCGTCAGCGAAGTTGCCGGCAT
GCTGGGCTACCGCTATACGGTCGAGGCCGAGGTGATCGACGGCGAAAAGCTCGGACGGCAGCTCGGTTTTCCCACCGCCA
ACATGCGCCTTCCGCCGGAGGTTGAACTTGCCGCCGGCATCTACGCCGTCCGCTTCCGCCGCCAGGACGGCACCCTCCAC
GACGCCGTCGCGAGCTACGGCCGCCGCCCGACGGTGACCGAAAACGGTGCGCCGCTGCTCGAAACCTATCTATTCGACTT
CAGCGGCGATCTCTACGGCCAGCGCTGCGCCGTCTCCTTCTTCGGCTATCTGAGACCCGAACTGAAATTCGACGGCCTCG
ATCCGCTGGTCGCCCAGATCAAGCGCGACGAGGAAGAGGCGAGGGCGCTGCTGTCGGGCGTCCAGCCCTTGGGCGAACTC
GACCGGAAGCTCTGCTTTTCCTGA

Upstream 100 bases:

>100_bases
ACGAGGCGATCCTCAACGCCTATCTCGATCGGGAAAACGCCGCGCCGAAGTGGTGGATGCCCCGCCTTGCATAGAGATTT
GCATAAAGAGAAGCCAGCCG

Downstream 100 bases:

>100_bases
GGCTGCGCGGGGTACGGGATTTTTCGATCGCAAACAAATTTTCGCTCGCGACGGGGGATCGCATAGCGCGAATTCTGCTC
TTCCTTTTCCAGGCAAAAAC

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLK
ARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFR
DENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH
DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGEL
DRKLCFS

Sequences:

>Translated_327_residues
MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLK
ARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFR
DENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH
DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGEL
DRKLCFS
>Mature_326_residues
TVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPHPRTVFRPETPVFRLTPAPLKA
RILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGASEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRD
ENADVASSSHIRALLKEGSVSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLHD
AVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQIKRDEEEARALLSGVQPLGELD
RKLCFS

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=299, Percent_Identity=36.7892976588629, Blast_Score=179, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24644927, Length=111, Percent_Identity=38.7387387387387, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004821
- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 36250; Mature: 36118

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH
CCEECCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA
CCCEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCH
SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCC
VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH
HHHHHHHHCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEEEECCCCCHH
DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
KRDEEEARALLSGVQPLGELDRKLCFS
HCCHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
TVFHRNETREPLPAHLKGGVIAIGNFDGVHRGHQSVLNRALEISKARGIPALVLTFEPH
CEECCCCCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
PRTVFRPETPVFRLTPAPLKARILETLGFNAVIEYPFDYEFSQRSADDFIHSILKDWLGA
CCCEECCCCCEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCH
SEVVTGFDFHFGRGREGGPAFLMNAGQTYGFGVTLIDAFRDENADVASSSHIRALLKEGS
HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHCCCCCCCCCHHHHHHHHHCCC
VSEVAGMLGYRYTVEAEVIDGEKLGRQLGFPTANMRLPPEVELAAGIYAVRFRRQDGTLH
HHHHHHHHCCEEEEEEEEECHHHHHHHHCCCCCCCCCCCCHHHHHCEEEEEEECCCCCHH
DAVASYGRRPTVTENGAPLLETYLFDFSGDLYGQRCAVSFFGYLRPELKFDGLDPLVAQI
HHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
KRDEEEARALLSGVQPLGELDRKLCFS
HCCHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]