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The map label for this gene is glcF [H]

Identifier: 209548059

GI number: 209548059

Start: 464191

End: 465501

Strand: Direct

Name: glcF [H]

Synonym: Rleg2_0452

Alternate gene names: 209548059

Gene position: 464191-465501 (Clockwise)

Preceding gene: 209548058

Following gene: 209548060

Centisome position: 10.23

GC content: 64.3

Gene sequence:

>1311_bases
ATGCAAACCAACTTCACCCCCGCCCAACTCGCCGATCCCGATGTCGCCGAATCCGAGCAGATTCTGCGCAAATGTGTCCA
TTGCGGTTTCTGCACCGCCACCTGTCCCACCTATGTGACGCTCGGCAATGAGCTCGACAGTCCACGCGGCCGCATCTACC
TGATCAAGGACATGCTGGAAAACGGCCGGCCGGCCGATGCCGAGGTCGTTACCCATATCGACCGCTGTCTATCCTGCCTT
GCCTGCGTCACCACCTGTCCCTCCGGCGTCGACTACATGCATCTGGTCGATCACGCCCGCGCCCATATCGAAAAGACCTA
CAGGCGCCCGTTGATGAACCGGCTGACGCGGGCGATCCTTGCCGCCGTGCTGCCCTATCCCGGCCGCTTCCGCCTGGCGC
TCAATCTCGCCCGCCTCGGCCGGCCCTTCGCCGGGCTGATGCGGGGGGCCGCGCTGAAACCCTTCGCCGCCATGCTGGCG
CTTGCGCCGCGCCGCATCCCCGCCGCTTCAGATTTCGCAAAACCCGGCAGCTATCTGCCCGAAACCGAACGGCGCGGCCG
GGTGGCGATGCTTTCCGGCTGCGCTCAGCCGGTGCTCGATCCCGGTATCAACGCGGCGGCGATCCGACTGCTGACCCGGC
TCGACGTCGAGGTCGTGCTGCCGGAAGGCGAGGTCTGCTGCGGCTCGCTGGTCCATCACATGGGCCGCGCCGAGCAGGCG
CTCGCCAGTGCGCGAACCAATGTCGATCTCTGGACGCGCGAGATCGACGGGCAGGGGCTCGACGCGATCATCATCACCGC
GTCGGGCTGCGGCACGACGATCAAGGATTACGGCCATATGCTGCGCCTTGATCCCGCCTATGCCGCAAAGGCGGCGAGGG
TCTCGGGCCTCGCCAAAGACATCACCGAATATCTGGCAACCCTCGAGCTGCCGGTGCACACGCCGAAGGGCATCACGGTC
GCCTATCACTCCGCCTGTTCCATGCAGCACGGCCAGCGCATTACGCTTGCCCCGAAGCAATTGCTGAAAGCGGCGGGTTT
CACCGTGCGCGATCCCGCCGAAGGCCATCTCTGCTGCGGTTCGGCCGGCACCTACAATATCATGCAGCCGGAGATCTCTG
CCGCGCTGAAGGCACGCAAGGTCAAAAACATCGAAGCCACCAAGGCCGAAATCATCGCCACCGGCAATATCGGCTGCATC
ACCCAGATCGCCACCGGCACCGGCATGCCGATCCTGCATACGGTCGAGCTGCTCGATTGGGCCTATGGCGGCGCTGTGCC
GGAAAAATTAACAGGTTTGTCGTTAGGTTGA

Upstream 100 bases:

>100_bases
CCGTCAATGCCATCCGATCTCCCCCCTTGTGGGGGAGATGTCCGGCAGGACAGAGGGGGGCGTCTCAGGCACAACGCCCG
CGAAGCGGAGGCCCCGCTAG

Downstream 100 bases:

>100_bases
CGTGAAAGGCCTGTCGGGCCGGTCTCGGGAGTTTAGACGATGTGGCGGGGAATGATCGTATTTGCGGGACTGCTCGGTGC
GGCGGGCGCCGCCCATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MQTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAEVVTHIDRCLSCL
ACVTTCPSGVDYMHLVDHARAHIEKTYRRPLMNRLTRAILAAVLPYPGRFRLALNLARLGRPFAGLMRGAALKPFAAMLA
LAPRRIPAASDFAKPGSYLPETERRGRVAMLSGCAQPVLDPGINAAAIRLLTRLDVEVVLPEGEVCCGSLVHHMGRAEQA
LASARTNVDLWTREIDGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSGLAKDITEYLATLELPVHTPKGITV
AYHSACSMQHGQRITLAPKQLLKAAGFTVRDPAEGHLCCGSAGTYNIMQPEISAALKARKVKNIEATKAEIIATGNIGCI
TQIATGTGMPILHTVELLDWAYGGAVPEKLTGLSLG

Sequences:

>Translated_436_residues
MQTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAEVVTHIDRCLSCL
ACVTTCPSGVDYMHLVDHARAHIEKTYRRPLMNRLTRAILAAVLPYPGRFRLALNLARLGRPFAGLMRGAALKPFAAMLA
LAPRRIPAASDFAKPGSYLPETERRGRVAMLSGCAQPVLDPGINAAAIRLLTRLDVEVVLPEGEVCCGSLVHHMGRAEQA
LASARTNVDLWTREIDGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSGLAKDITEYLATLELPVHTPKGITV
AYHSACSMQHGQRITLAPKQLLKAAGFTVRDPAEGHLCCGSAGTYNIMQPEISAALKARKVKNIEATKAEIIATGNIGCI
TQIATGTGMPILHTVELLDWAYGGAVPEKLTGLSLG
>Mature_436_residues
MQTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAEVVTHIDRCLSCL
ACVTTCPSGVDYMHLVDHARAHIEKTYRRPLMNRLTRAILAAVLPYPGRFRLALNLARLGRPFAGLMRGAALKPFAAMLA
LAPRRIPAASDFAKPGSYLPETERRGRVAMLSGCAQPVLDPGINAAAIRLLTRLDVEVVLPEGEVCCGSLVHHMGRAEQA
LASARTNVDLWTREIDGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSGLAKDITEYLATLELPVHTPKGITV
AYHSACSMQHGQRITLAPKQLLKAAGFTVRDPAEGHLCCGSAGTYNIMQPEISAALKARKVKNIEATKAEIIATGNIGCI
TQIATGTGMPILHTVELLDWAYGGAVPEKLTGLSLG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=422, Percent_Identity=42.1800947867299, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1786497, Length=240, Percent_Identity=25, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 46768; Mature: 46768

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
CCCCCCCHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHH
NGRPADAEVVTHIDRCLSCLACVTTCPSGVDYMHLVDHARAHIEKTYRRPLMNRLTRAIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLPYPGRFRLALNLARLGRPFAGLMRGAALKPFAAMLALAPRRIPAASDFAKPGSYLP
HHHCCCCCCEEEEEEHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ETERRGRVAMLSGCAQPVLDPGINAAAIRLLTRLDVEVVLPEGEVCCGSLVHHMGRAEQA
CHHHCCCCHHHHHCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCHHHHH
LASARTNVDLWTREIDGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSGLAKD
HHHHCCCCHHEEEECCCCCCCEEEEEECCCCCCHHHCCCEEEECHHHHHHHHHHHHHHHH
ITEYLATLELPVHTPKGITVAYHSACSMQHGQRITLAPKQLLKAAGFTVRDPAEGHLCCG
HHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCEEEECHHHHHHHCCCEECCCCCCCEEEC
SAGTYNIMQPEISAALKARKVKNIEATKAEIIATGNIGCITQIATGTGMPILHTVELLDW
CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH
AYGGAVPEKLTGLSLG
HHCCCCHHHHCCCCCC
>Mature Secondary Structure
MQTNFTPAQLADPDVAESEQILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLE
CCCCCCCHHCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCCEEEEEHHHHH
NGRPADAEVVTHIDRCLSCLACVTTCPSGVDYMHLVDHARAHIEKTYRRPLMNRLTRAIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLPYPGRFRLALNLARLGRPFAGLMRGAALKPFAAMLALAPRRIPAASDFAKPGSYLP
HHHCCCCCCEEEEEEHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ETERRGRVAMLSGCAQPVLDPGINAAAIRLLTRLDVEVVLPEGEVCCGSLVHHMGRAEQA
CHHHCCCCHHHHHCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCHHHHH
LASARTNVDLWTREIDGQGLDAIIITASGCGTTIKDYGHMLRLDPAYAAKAARVSGLAKD
HHHHCCCCHHEEEECCCCCCCEEEEEECCCCCCHHHCCCEEEECHHHHHHHHHHHHHHHH
ITEYLATLELPVHTPKGITVAYHSACSMQHGQRITLAPKQLLKAAGFTVRDPAEGHLCCG
HHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCEEEECHHHHHHHCCCEECCCCCCCEEEC
SAGTYNIMQPEISAALKARKVKNIEATKAEIIATGNIGCITQIATGTGMPILHTVELLDW
CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHH
AYGGAVPEKLTGLSLG
HHCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]