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The map label for this gene is yaiS [H]

Identifier: 209548024

GI number: 209548024

Start: 427237

End: 427869

Strand: Direct

Name: yaiS [H]

Synonym: Rleg2_0416

Alternate gene names: 209548024

Gene position: 427237-427869 (Clockwise)

Preceding gene: 209548023

Following gene: 209548025

Centisome position: 9.41

GC content: 55.92

Gene sequence:

>633_bases
ATGAATATTCTCGCGATCGGTGCCCATTTTGACGACGTGGAACTGGGCTGTGGCGGTGCATTGGCACGCCATGCGGCAAA
CGGCGACACGGTTTATGTCTATGTCGCAACCGTATCCGGCTTTTCCAACCAATATGACCAGTCCGTGCGCAGCAGCCAGG
TCGCCAGGGCGGAAGCGGATGCTGCGATGGAGATTCTCGGCGTCCACAAGATGTTTTGCGGCGAATTCAAAACGCTCCAG
ATCGAATTCGTCGATCCACTGAATATCGAGATCCTCAAGCTCGTGCAGGATCTGAAGATCGACATGGTCTACACCCATTG
GGTCGGAGACATCCACCATGACCATCTGGCCTTGTCGCGAGCGTCGCTGCACAGCTGCCGCCACGTGCCTCGCCTTCTGA
TGTACCGCAGCAACTGGTATCATTCGACGGTCGATTTCAGGGGGAATTTCTACGTCGACATCACCTCCCATTGGGACCAG
AAGGAAAAGGCGATCCTTGCCCATGAATCCGAGATGGAGCGCACGGGGCGGAAATGGGTGAGCTTCTTCCGCAATGAAGC
CGAAAACGCCGGCCAGCGCATCGGTGTAAAATATGCCGAAGTGTTTGAGGTGGTGAAGTGGCTGCAGCCCTGA

Upstream 100 bases:

>100_bases
ATCCGCAGCCTTTCGGCGAGTTCATGCCCTATCTCAGCATCCTCGACACACTGCTGAATTGTGGTATTGCAGGCACGCGT
GACCTGCTCTGGAGTTGTAA

Downstream 100 bases:

>100_bases
GAAAGATTTTGACCTTTGGCTCCATGCTGCTCCCCTATGGTGTGCATGAGTTAAGGCGCAGGCTAAGTAGTCGTCACAAA
ATCTCTGCTGATGTTGCGAG

Product: LmbE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MNILAIGAHFDDVELGCGGALARHAANGDTVYVYVATVSGFSNQYDQSVRSSQVARAEADAAMEILGVHKMFCGEFKTLQ
IEFVDPLNIEILKLVQDLKIDMVYTHWVGDIHHDHLALSRASLHSCRHVPRLLMYRSNWYHSTVDFRGNFYVDITSHWDQ
KEKAILAHESEMERTGRKWVSFFRNEAENAGQRIGVKYAEVFEVVKWLQP

Sequences:

>Translated_210_residues
MNILAIGAHFDDVELGCGGALARHAANGDTVYVYVATVSGFSNQYDQSVRSSQVARAEADAAMEILGVHKMFCGEFKTLQ
IEFVDPLNIEILKLVQDLKIDMVYTHWVGDIHHDHLALSRASLHSCRHVPRLLMYRSNWYHSTVDFRGNFYVDITSHWDQ
KEKAILAHESEMERTGRKWVSFFRNEAENAGQRIGVKYAEVFEVVKWLQP
>Mature_210_residues
MNILAIGAHFDDVELGCGGALARHAANGDTVYVYVATVSGFSNQYDQSVRSSQVARAEADAAMEILGVHKMFCGEFKTLQ
IEFVDPLNIEILKLVQDLKIDMVYTHWVGDIHHDHLALSRASLHSCRHVPRLLMYRSNWYHSTVDFRGNFYVDITSHWDQ
KEKAILAHESEMERTGRKWVSFFRNEAENAGQRIGVKYAEVFEVVKWLQP

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

Organism=Escherichia coli, GI87081726, Length=145, Percent_Identity=35.8620689655172, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 23999; Mature: 23999

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILAIGAHFDDVELGCGGALARHAANGDTVYVYVATVSGFSNQYDQSVRSSQVARAEAD
CCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
AAMEILGVHKMFCGEFKTLQIEFVDPLNIEILKLVQDLKIDMVYTHWVGDIHHDHLALSR
HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHH
ASLHSCRHVPRLLMYRSNWYHSTVDFRGNFYVDITSHWDQKEKAILAHESEMERTGRKWV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SFFRNEAENAGQRIGVKYAEVFEVVKWLQP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILAIGAHFDDVELGCGGALARHAANGDTVYVYVATVSGFSNQYDQSVRSSQVARAEAD
CCEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
AAMEILGVHKMFCGEFKTLQIEFVDPLNIEILKLVQDLKIDMVYTHWVGDIHHDHLALSR
HHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHEEEEEEHHCCCCHHHHHHHH
ASLHSCRHVPRLLMYRSNWYHSTVDFRGNFYVDITSHWDQKEKAILAHESEMERTGRKWV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
SFFRNEAENAGQRIGVKYAEVFEVVKWLQP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808933; 9278503 [H]