| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yjgN [H]
Identifier: 209547995
GI number: 209547995
Start: 400252
End: 401334
Strand: Direct
Name: yjgN [H]
Synonym: Rleg2_0387
Alternate gene names: 209547995
Gene position: 400252-401334 (Clockwise)
Preceding gene: 209547994
Following gene: 209547996
Centisome position: 8.82
GC content: 59.37
Gene sequence:
>1083_bases ATGGATAACAGAGTGTCCGCGGGCTCCGCGGCGAACGCGTTTGAACGTGCCCGGTTCACCGGCACCGCATCGGAATATTT CGGTATCTGGATCGTCAATGTCCTTTTGACGATCGTAACGCTCGGCATCTATTCCGCCTGGGCGAAAGTGCGGCGCAATC GCTATTTCTACGGCAACACCGTCCTGCTTGGCCGCGCTTTCGAATATCACGCCACCGGCAAGCAGATTCTCATCGGTCGC CTCATCGTCTTCGCCTTCGTGGTCGTGGCCAACATTCTGGCGGCGATCCATCCGCTGTTTTCGCTGGTGACCACGATCCT GGTGCTCATCGCCCTTCCTTGGCTGATCGTCAGAGGCATACGTTTCAACGCCCGCGTGACCAGCTACCGCAATGTGCGAT TTGATTTCACCGGCACGGCCGGCGGGGCCTTCGTCTCCGTGATGCTCGGAGGCCTCGTCGCCTTCCTGTCGCTGGGTCTG CTTGCGCCCCTCGCCAGCCGCTGGCTCAACCGGTATGTTTTCAACAATCTCCGCTATGGCAACCGGCCTTTCGATACCGA TCCCAAGATTGGCACGCTCTACCGCGCGCTTCTCATCCCGGCCCTGATGGTCGTGCTGGGCCTAGTCGTTCTCGCCGGGT TGGTTGCGATCGCGGTCGTCGGAATGCAGGCCAATGACCCCGGCGCATTCGAGCATGACGCCGCTGTGTTGATCATAGTG TCGGGAATGTATCTTGTCGTTTTCGGCCTGATCATCGTCTATGGCCTTGCAGGCCTCATATATCGGGCCGCCGTCCATAA CATCGTCTGGTCGTCGACCCGCATCGACGGCCAGCATCTCTTGCGCAGCGATCTTTCCCGTGCACGCTATGCCTGGATCG CCATATCGAACGTCGTGGTGACGATGCTTACCCTCGGCTTGATGCGCCCCTGGGCGGCGGTTCGTCTGGCACGCTATGTG GCCGAGCACACGGCGATCCGCATCGAAGGCGAAATCGGCGAGGTCTTTACGCAGTTTCAAACGACTGGCGCCGCCGTCGG TGCGGAATATATGAGTATGGAAGGGATCGATTTTGGTTTCTGA
Upstream 100 bases:
>100_bases TTCAGGTTGTCATTTCTTCGCCTTTGCTTTTCTGTTGGCGCGCTCGACACGTGATTCTCATCATGATGTGGCGGGCAATG TGCTGGGGGAAGCAAAGATC
Downstream 100 bases:
>100_bases CGCAGAGACCGTCGCCAAAGGGGAATGGTATCCGCCGCATTCGAGCGGCTCCGTTCCCGCACGCCTGCTGTCGCGCGGCG GGCGCCTGCTCGCCGTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MDNRVSAGSAANAFERARFTGTASEYFGIWIVNVLLTIVTLGIYSAWAKVRRNRYFYGNTVLLGRAFEYHATGKQILIGR LIVFAFVVVANILAAIHPLFSLVTTILVLIALPWLIVRGIRFNARVTSYRNVRFDFTGTAGGAFVSVMLGGLVAFLSLGL LAPLASRWLNRYVFNNLRYGNRPFDTDPKIGTLYRALLIPALMVVLGLVVLAGLVAIAVVGMQANDPGAFEHDAAVLIIV SGMYLVVFGLIIVYGLAGLIYRAAVHNIVWSSTRIDGQHLLRSDLSRARYAWIAISNVVVTMLTLGLMRPWAAVRLARYV AEHTAIRIEGEIGEVFTQFQTTGAAVGAEYMSMEGIDFGF
Sequences:
>Translated_360_residues MDNRVSAGSAANAFERARFTGTASEYFGIWIVNVLLTIVTLGIYSAWAKVRRNRYFYGNTVLLGRAFEYHATGKQILIGR LIVFAFVVVANILAAIHPLFSLVTTILVLIALPWLIVRGIRFNARVTSYRNVRFDFTGTAGGAFVSVMLGGLVAFLSLGL LAPLASRWLNRYVFNNLRYGNRPFDTDPKIGTLYRALLIPALMVVLGLVVLAGLVAIAVVGMQANDPGAFEHDAAVLIIV SGMYLVVFGLIIVYGLAGLIYRAAVHNIVWSSTRIDGQHLLRSDLSRARYAWIAISNVVVTMLTLGLMRPWAAVRLARYV AEHTAIRIEGEIGEVFTQFQTTGAAVGAEYMSMEGIDFGF >Mature_360_residues MDNRVSAGSAANAFERARFTGTASEYFGIWIVNVLLTIVTLGIYSAWAKVRRNRYFYGNTVLLGRAFEYHATGKQILIGR LIVFAFVVVANILAAIHPLFSLVTTILVLIALPWLIVRGIRFNARVTSYRNVRFDFTGTAGGAFVSVMLGGLVAFLSLGL LAPLASRWLNRYVFNNLRYGNRPFDTDPKIGTLYRALLIPALMVVLGLVVLAGLVAIAVVGMQANDPGAFEHDAAVLIIV SGMYLVVFGLIIVYGLAGLIYRAAVHNIVWSSTRIDGQHLLRSDLSRARYAWIAISNVVVTMLTLGLMRPWAAVRLARYV AEHTAIRIEGEIGEVFTQFQTTGAAVGAEYMSMEGIDFGF
Specific function: Unknown
COG id: COG4269
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48995003, Length=125, Percent_Identity=40, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010295 [H]
Pfam domain/function: PF05987 DUF898 [H]
EC number: NA
Molecular weight: Translated: 39460; Mature: 39460
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRVSAGSAANAFERARFTGTASEYFGIWIVNVLLTIVTLGIYSAWAKVRRNRYFYGNT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCE VLLGRAFEYHATGKQILIGRLIVFAFVVVANILAAIHPLFSLVTTILVLIALPWLIVRGI EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFNARVTSYRNVRFDFTGTAGGAFVSVMLGGLVAFLSLGLLAPLASRWLNRYVFNNLRYG CCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NRPFDTDPKIGTLYRALLIPALMVVLGLVVLAGLVAIAVVGMQANDPGAFEHDAAVLIIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHH SGMYLVVFGLIIVYGLAGLIYRAAVHNIVWSSTRIDGQHLLRSDLSRARYAWIAISNVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TMLTLGLMRPWAAVRLARYVAEHTAIRIEGEIGEVFTQFQTTGAAVGAEYMSMEGIDFGF HHHHHHHHCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDNRVSAGSAANAFERARFTGTASEYFGIWIVNVLLTIVTLGIYSAWAKVRRNRYFYGNT CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCE VLLGRAFEYHATGKQILIGRLIVFAFVVVANILAAIHPLFSLVTTILVLIALPWLIVRGI EEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFNARVTSYRNVRFDFTGTAGGAFVSVMLGGLVAFLSLGLLAPLASRWLNRYVFNNLRYG CCCCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NRPFDTDPKIGTLYRALLIPALMVVLGLVVLAGLVAIAVVGMQANDPGAFEHDAAVLIIV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHH SGMYLVVFGLIIVYGLAGLIYRAAVHNIVWSSTRIDGQHLLRSDLSRARYAWIAISNVVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TMLTLGLMRPWAAVRLARYVAEHTAIRIEGEIGEVFTQFQTTGAAVGAEYMSMEGIDFGF HHHHHHHHCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677609; 8253666 [H]