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The map label for this gene is 209547982

Identifier: 209547982

GI number: 209547982

Start: 381782

End: 383191

Strand: Direct

Name: 209547982

Synonym: Rleg2_0374

Alternate gene names: NA

Gene position: 381782-383191 (Clockwise)

Preceding gene: 209547979

Following gene: 209547983

Centisome position: 8.41

GC content: 67.94

Gene sequence:

>1410_bases
ATGGCGGAACGGAAAATATTCGCAGGCCCGAAATTGCGGCGCATCCGCAATGCGCTGGCGCTGACCCAGACCGCCATGGC
CGAGGCGCTGGAAATATCGCCCTCCTATCTGAACCTGATCGAGCGCAACCAGCGGCCGCTGACGGTGCAGCTGCTGTTGA
AGCTCGCGACCGTCTACAGGGTCGATCTGGAGGAGTTGCGCGGGCAGACCGGCGGCAGTCTCGGCCAGCTGAAGGAGGTC
TTTGCCGATCCACTGCTATTGGGCGAGCTGCCCGGCGACCAGGAACTGGTCGAGGTGGCAGAAGCCGCACCCAATGCGGC
AAGCGGCATGATCAAGCTTTACCGCGCCTATCGCGAGCAGGCGGCAAGGCTGTCCGATCTGACGGCGCTGATGGCCGCTG
AAGGCCATGCACCTGTCGCCGCCGGCCGTTTGCCGCTCGACGAGGTGCGCGAGACGCTGGAACGCCGCTCGGCCTATTTC
GGGCGGATCGAGACGGCGGCGGAAGCCCTTGCCGCAACGCTTCCCGGCGGCCTCGATCTTGCTGCCGGGCTGAAGGATTG
GCTGCGCGCAGAGCGCGGCATCGCGGTGCGGGTCCTGCCGGTGCACGTCATGCCGGATCTGCGCCGCCGTTTCGATCGCC
ATTCGATGCGCCTTTTCATCTCGGAGCGCCTGTCGCAGGCCGACCGCGCCCATGAAATCGCCGTTGAGGCGGCGACCCTT
GCCTTGTTGCCGGCCATCGACGCCGAACTCGACGATCTCCAGCTCTCCTCGGCCGAGGCGCGCCGCATCGCCCGCTTCGA
GCTTGCCCGCATCGCCGCCCTGGCGCTTGCCATGCCCTATGAGGCCTTCCTGTCCGCGGCGAAGACGACACGCTACGATA
TCGACATTCTGCGCGCCCGCTTCGGCGTCTCCTTCGGCCATGCCGCCGCACGCCTGACGATGCTGCAGCGCCTGGGTGCC
GCCGCCATTCCCTTCTTCCTGATCGAGATCGATGCCGCGGGCCACCGGCTGCGCCGGGCAGGCGCCCAGGGTTTTCCACA
GGCCCGCTTCGGCGGCGGCTGTCCGAAGCTCAATCTCCACGCAGCCTTCCTGCAGCCGGGCCAGATCCTGGCCGAGACCG
TGGTCATGCCCGATGGTGCCTCCTTCCTGACGGTTGCCCGCACGCTCGAGGGGCCGAGCGTCGAATTCGGGGAAAGGCTG
AGGCGCACCGCAATCCTGATCGGTTGCGACGCTGCCCTCGGCGAGGCACTGATCTATGGCCAGGCGACGGCGCTCGAGCC
GGTGGCGATCGGCCCCGCCTGTCGCCTTTGCGAGCGGCGCGGCTGTCTTTCCCGGGCCGAGCCGCCGGTGACGCGGCCGC
TCGGGCTCGACGAGATGGTGGCGGGGCTCAGCGCCTTCGATTTCCAGTGA

Upstream 100 bases:

>100_bases
CTAGGAAAGAGGTTAAGATGACGAGGATTGACAGAGCGGCGCTGTGAATTTGTAAAATTTTGTAAATGCTGACGCCGCAG
GCCTGTCAAAGGGTGTGACA

Downstream 100 bases:

>100_bases
TTGTGAAATCATTGAAGGCGCAGGATTTTGCGCTTGTGGGCTGTGAAATTCCTTCTTAGTCTGCTGGCAAAACCAGAGGG
AAAAGACGTCCGGGGGTGCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MAERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQLLLKLATVYRVDLEELRGQTGGSLGQLKEV
FADPLLLGELPGDQELVEVAEAAPNAASGMIKLYRAYREQAARLSDLTALMAAEGHAPVAAGRLPLDEVRETLERRSAYF
GRIETAAEALAATLPGGLDLAAGLKDWLRAERGIAVRVLPVHVMPDLRRRFDRHSMRLFISERLSQADRAHEIAVEAATL
ALLPAIDAELDDLQLSSAEARRIARFELARIAALALAMPYEAFLSAAKTTRYDIDILRARFGVSFGHAAARLTMLQRLGA
AAIPFFLIEIDAAGHRLRRAGAQGFPQARFGGGCPKLNLHAAFLQPGQILAETVVMPDGASFLTVARTLEGPSVEFGERL
RRTAILIGCDAALGEALIYGQATALEPVAIGPACRLCERRGCLSRAEPPVTRPLGLDEMVAGLSAFDFQ

Sequences:

>Translated_469_residues
MAERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQLLLKLATVYRVDLEELRGQTGGSLGQLKEV
FADPLLLGELPGDQELVEVAEAAPNAASGMIKLYRAYREQAARLSDLTALMAAEGHAPVAAGRLPLDEVRETLERRSAYF
GRIETAAEALAATLPGGLDLAAGLKDWLRAERGIAVRVLPVHVMPDLRRRFDRHSMRLFISERLSQADRAHEIAVEAATL
ALLPAIDAELDDLQLSSAEARRIARFELARIAALALAMPYEAFLSAAKTTRYDIDILRARFGVSFGHAAARLTMLQRLGA
AAIPFFLIEIDAAGHRLRRAGAQGFPQARFGGGCPKLNLHAAFLQPGQILAETVVMPDGASFLTVARTLEGPSVEFGERL
RRTAILIGCDAALGEALIYGQATALEPVAIGPACRLCERRGCLSRAEPPVTRPLGLDEMVAGLSAFDFQ
>Mature_468_residues
AERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQLLLKLATVYRVDLEELRGQTGGSLGQLKEVF
ADPLLLGELPGDQELVEVAEAAPNAASGMIKLYRAYREQAARLSDLTALMAAEGHAPVAAGRLPLDEVRETLERRSAYFG
RIETAAEALAATLPGGLDLAAGLKDWLRAERGIAVRVLPVHVMPDLRRRFDRHSMRLFISERLSQADRAHEIAVEAATLA
LLPAIDAELDDLQLSSAEARRIARFELARIAALALAMPYEAFLSAAKTTRYDIDILRARFGVSFGHAAARLTMLQRLGAA
AIPFFLIEIDAAGHRLRRAGAQGFPQARFGGGCPKLNLHAAFLQPGQILAETVVMPDGASFLTVARTLEGPSVEFGERLR
RTAILIGCDAALGEALIYGQATALEPVAIGPACRLCERRGCLSRAEPPVTRPLGLDEMVAGLSAFDFQ

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 50835; Mature: 50703

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQLLLKLATVYR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
VDLEELRGQTGGSLGQLKEVFADPLLLGELPGDQELVEVAEAAPNAASGMIKLYRAYREQ
HHHHHHCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AARLSDLTALMAAEGHAPVAAGRLPLDEVRETLERRSAYFGRIETAAEALAATLPGGLDL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAGLKDWLRAERGIAVRVLPVHVMPDLRRRFDRHSMRLFISERLSQADRAHEIAVEAATL
HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLPAIDAELDDLQLSSAEARRIARFELARIAALALAMPYEAFLSAAKTTRYDIDILRAR
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FGVSFGHAAARLTMLQRLGAAAIPFFLIEIDAAGHRLRRAGAQGFPQARFGGGCPKLNLH
HCCCHHHHHHHHHHHHHHCHHHHCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AAFLQPGQILAETVVMPDGASFLTVARTLEGPSVEFGERLRRTAILIGCDAALGEALIYG
EECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHEEEEECCHHHHHHHHCC
QATALEPVAIGPACRLCERRGCLSRAEPPVTRPLGLDEMVAGLSAFDFQ
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCC
>Mature Secondary Structure 
AERKIFAGPKLRRIRNALALTQTAMAEALEISPSYLNLIERNQRPLTVQLLLKLATVYR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHH
VDLEELRGQTGGSLGQLKEVFADPLLLGELPGDQELVEVAEAAPNAASGMIKLYRAYREQ
HHHHHHCCCCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AARLSDLTALMAAEGHAPVAAGRLPLDEVRETLERRSAYFGRIETAAEALAATLPGGLDL
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AAGLKDWLRAERGIAVRVLPVHVMPDLRRRFDRHSMRLFISERLSQADRAHEIAVEAATL
HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLPAIDAELDDLQLSSAEARRIARFELARIAALALAMPYEAFLSAAKTTRYDIDILRAR
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
FGVSFGHAAARLTMLQRLGAAAIPFFLIEIDAAGHRLRRAGAQGFPQARFGGGCPKLNLH
HCCCHHHHHHHHHHHHHHCHHHHCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEE
AAFLQPGQILAETVVMPDGASFLTVARTLEGPSVEFGERLRRTAILIGCDAALGEALIYG
EECCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHEEEEECCHHHHHHHHCC
QATALEPVAIGPACRLCERRGCLSRAEPPVTRPLGLDEMVAGLSAFDFQ
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]