| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yhiN [H]
Identifier: 209547974
GI number: 209547974
Start: 372366
End: 373586
Strand: Direct
Name: yhiN [H]
Synonym: Rleg2_0366
Alternate gene names: 209547974
Gene position: 372366-373586 (Clockwise)
Preceding gene: 209547968
Following gene: 209547975
Centisome position: 8.21
GC content: 63.23
Gene sequence:
>1221_bases ATGGAAAAAGAAGGCGCTGTCTTGATCGGGGAAACAAGTTTGCAGCGCAAAAGCGACGTCATCGTCATCGGCGCCGGGGC GGCGGGCATGATGGCGGCCATCCGGGCGGGAAAACGCGGCCGCTCGATCGTGGTCCTCGACCATGCAAGAGCGCCGGGCG AGAAGATCCGCATCTCGGGCGGCGGCCGCTGCAATTTTACCAATATCCATGCCGGGTCGAAGAACTTCCTTTCCGCCAAT CCGCATTTCTGCAAGTCGGCGCTTGCCCGTTTCACGCCGGCCGATTTCATCGCCATGGTCGACCGGCACGGCATCGCCTG GCATGAAAAGACGCTCGGCCAGCTTTTCTGCGACGATAGCGCCAAAGACGTCATCCGCATGCTGCTGACGGAGATGCGCG CGGCCGGCGCGCAGCTGCATCTCGGCACCGAGATAACAGCTGTCGAAAAGGTGGAGGCGGGTTTTCGCGTCTCGACCGGT GAAGATGCTTTCGAAGCCTCGTCGCTGATCGTCGCCACTGGCGGCAAGTCGATCCCGAAGATGGGCGCCACCGGCTTTGC CTATCGCCTGGCCGAACAGTTCGGCCTGGCGGTGCTCGAAACCCGCCCCGGCCTCGTGCCGCTGACGCTCGATCCCGGCC TGCTCGAGGCCATCGCGCCGCTTGCCGGCATTTCCGCCCCGGCCGAAATCCGCCATGGCAGGACCGCCTTTCGCGAAGCG CTGCTGTTTACCCATCGCGGCCTCAGCGGCCCCGCCATCCTGCAGATCTCCTCCTATTGGCGCGAAGGCGACGAGATCGT CGTTTCGATCGAACCGGATATCGACATTGGAGTACATCTGAAGACGGTAAAGCAACTGAATGGCCGCCAGTCGCCGCAGA CAGCACTCAGCGACATCCTGCCGAAGCGGCTGGCCCAATTTCTCGTCGAGCGCGAAAAGATCGCCGGCAACATGGCCGAC CTGCCCGACAAGGTGCTGCTGCGCCTGGCCGCGGCGGCGCAGAACTTTGCGGTCAAGCCGTCCGGCTCGGAAGGTTACCG CACCGCTGAAGTGACGCTCGGCGGTATCGATACGGCAGCGCTCGATTCCCGCAGCATGGAGGCCAAGGCTGTGCCCGGGC TTTATTTCATCGGCGAATGTGTCGACGTCACCGGCTGGCTCGGCGGCTATAATTTCCAATGGGCCTGGGCCTCCGGATTT GCCGCCGGCGAATATGCGTAA
Upstream 100 bases:
>100_bases TTTTTGGGGACATGACACACCGGTTTGGTTGATCGTGGCGCCATCATAACCGGACTTTGCCAATTGGCGAGAGGTTGAGA ACGTTGACTTTCGCCCTTTG
Downstream 100 bases:
>100_bases ATCGAATGCATGTCGCCCGGAAGTGTGCGGCGGTTCCGGGACAACGACATGCATAAAACAATGGGCTAAAGCGCGTCGCA TGAATCAAATTTGGTGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MEKEGAVLIGETSLQRKSDVIVIGAGAAGMMAAIRAGKRGRSIVVLDHARAPGEKIRISGGGRCNFTNIHAGSKNFLSAN PHFCKSALARFTPADFIAMVDRHGIAWHEKTLGQLFCDDSAKDVIRMLLTEMRAAGAQLHLGTEITAVEKVEAGFRVSTG EDAFEASSLIVATGGKSIPKMGATGFAYRLAEQFGLAVLETRPGLVPLTLDPGLLEAIAPLAGISAPAEIRHGRTAFREA LLFTHRGLSGPAILQISSYWREGDEIVVSIEPDIDIGVHLKTVKQLNGRQSPQTALSDILPKRLAQFLVEREKIAGNMAD LPDKVLLRLAAAAQNFAVKPSGSEGYRTAEVTLGGIDTAALDSRSMEAKAVPGLYFIGECVDVTGWLGGYNFQWAWASGF AAGEYA
Sequences:
>Translated_406_residues MEKEGAVLIGETSLQRKSDVIVIGAGAAGMMAAIRAGKRGRSIVVLDHARAPGEKIRISGGGRCNFTNIHAGSKNFLSAN PHFCKSALARFTPADFIAMVDRHGIAWHEKTLGQLFCDDSAKDVIRMLLTEMRAAGAQLHLGTEITAVEKVEAGFRVSTG EDAFEASSLIVATGGKSIPKMGATGFAYRLAEQFGLAVLETRPGLVPLTLDPGLLEAIAPLAGISAPAEIRHGRTAFREA LLFTHRGLSGPAILQISSYWREGDEIVVSIEPDIDIGVHLKTVKQLNGRQSPQTALSDILPKRLAQFLVEREKIAGNMAD LPDKVLLRLAAAAQNFAVKPSGSEGYRTAEVTLGGIDTAALDSRSMEAKAVPGLYFIGECVDVTGWLGGYNFQWAWASGF AAGEYA >Mature_406_residues MEKEGAVLIGETSLQRKSDVIVIGAGAAGMMAAIRAGKRGRSIVVLDHARAPGEKIRISGGGRCNFTNIHAGSKNFLSAN PHFCKSALARFTPADFIAMVDRHGIAWHEKTLGQLFCDDSAKDVIRMLLTEMRAAGAQLHLGTEITAVEKVEAGFRVSTG EDAFEASSLIVATGGKSIPKMGATGFAYRLAEQFGLAVLETRPGLVPLTLDPGLLEAIAPLAGISAPAEIRHGRTAFREA LLFTHRGLSGPAILQISSYWREGDEIVVSIEPDIDIGVHLKTVKQLNGRQSPQTALSDILPKRLAQFLVEREKIAGNMAD LPDKVLLRLAAAAQNFAVKPSGSEGYRTAEVTLGGIDTAALDSRSMEAKAVPGLYFIGECVDVTGWLGGYNFQWAWASGF AAGEYA
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=381, Percent_Identity=51.4435695538058, Blast_Score=398, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 43225; Mature: 43225
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEGAVLIGETSLQRKSDVIVIGAGAAGMMAAIRAGKRGRSIVVLDHARAPGEKIRISG CCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECC GGRCNFTNIHAGSKNFLSANPHFCKSALARFTPADFIAMVDRHGIAWHEKTLGQLFCDDS CCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC AKDVIRMLLTEMRAAGAQLHLGTEITAVEKVEAGFRVSTGEDAFEASSLIVATGGKSIPK HHHHHHHHHHHHHHCCCEEEECCCEEHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCC MGATGFAYRLAEQFGLAVLETRPGLVPLTLDPGLLEAIAPLAGISAPAEIRHGRTAFREA CCCCHHHHHHHHHHCEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCHHHHCCHHHHHHH LLFTHRGLSGPAILQISSYWREGDEIVVSIEPDIDIGVHLKTVKQLNGRQSPQTALSDIL HHHHHCCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCEEHHHHHHHCCCCCHHHHHHHHH PKRLAQFLVEREKIAGNMADLPDKVLLRLAAAAQNFAVKPSGSEGYRTAEVTLGGIDTAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCHHH LDSRSMEAKAVPGLYFIGECVDVTGWLGGYNFQWAWASGFAAGEYA CCCCCCCHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MEKEGAVLIGETSLQRKSDVIVIGAGAAGMMAAIRAGKRGRSIVVLDHARAPGEKIRISG CCCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECC GGRCNFTNIHAGSKNFLSANPHFCKSALARFTPADFIAMVDRHGIAWHEKTLGQLFCDDS CCEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC AKDVIRMLLTEMRAAGAQLHLGTEITAVEKVEAGFRVSTGEDAFEASSLIVATGGKSIPK HHHHHHHHHHHHHHCCCEEEECCCEEHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCC MGATGFAYRLAEQFGLAVLETRPGLVPLTLDPGLLEAIAPLAGISAPAEIRHGRTAFREA CCCCHHHHHHHHHHCEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCHHHHCCHHHHHHH LLFTHRGLSGPAILQISSYWREGDEIVVSIEPDIDIGVHLKTVKQLNGRQSPQTALSDIL HHHHHCCCCCCEEEEEHHHHCCCCEEEEEECCCCCCCEEHHHHHHHCCCCCHHHHHHHHH PKRLAQFLVEREKIAGNMADLPDKVLLRLAAAAQNFAVKPSGSEGYRTAEVTLGGIDTAA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCCEEEEEEECCCCHHH LDSRSMEAKAVPGLYFIGECVDVTGWLGGYNFQWAWASGFAAGEYA CCCCCCCHHCCCCEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]