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The map label for this gene is aglF [H]

Identifier: 209547964

GI number: 209547964

Start: 359732

End: 360745

Strand: Direct

Name: aglF [H]

Synonym: Rleg2_0356

Alternate gene names: 209547964

Gene position: 359732-360745 (Clockwise)

Preceding gene: 209547963

Following gene: 209547965

Centisome position: 7.93

GC content: 59.86

Gene sequence:

>1014_bases
ATGCTGTTGCAGATAGTGTCCGCTTTGGGCGTCGTGGTCGTCGCCGTTTTGGCGTGCTCGGCCTATTTCTATTTTTCGAA
CAAGATCCTGGATCTCGCGCTGCCGGTCAAGGATGGCGACATCCGCGCCGCCTCGCGCAATCTCAACCGCCGTGCCCTCG
TGCGGCCGTGGTTGTTCGTCGGTCCGGCGCTCTTCCTGCTCGTCGTCTATCTCGTCTATCCCGTCGTTGCGACCTTCATC
CTCTCCTTCTACGATCGCGCCGGCGAACAATTCGTCGGCGTCGCCAACTATCAATGGGCACTCGGCGACCGCGAATTCCG
CCAGTCGATCTTCAACAACATCCTCTGGCTCGCCGTCGTGCCGGCCGCCTGCACCTTTTTCGGCCTCGTCATCGCCGTGA
TGACCGATCGCATCTGGTGGGGCAATATCGCCAAAAGCATCGTCTTCATGCCGATGGCGATTTCCTTCGTCGGCGCCTCA
GTCATCTGGAAATTCATCTATGAATATCGCGGCGGCAACGACGTCCAGATCGGCCTCTTGAACGCCATCGTCCAGACGTT
CGGCGGCACGCCCGAGGTGTGGATCTCCGTTCCCTTCTGGAACAATTTCTTCCTGATGGTCATCCTGATCTGGATCCAGA
CCGGTTTTGCCATGGTCATCCTGTCGGCTGCCCTTCGCGGCATTCCCGAGGAGACGATCGAGGCGGCCGTCATCGACGGC
GCCAATGGCTGGCAGATCTTCTGGCGCATCATGGTGCCGCAAGTCTGGGGCTCGATCGCGGTCGTCTGGACGACGATCAC
CATCCTCGTCCTCAAGGTCTTCGATATCGTGCTGACCATGACCAACGGCCAATGGCAGTCGATGGTGCTGGCGAACCTGA
TGTTCAACTGGCTGTTCCGCGGCGGCGGCGATTCCGGCCGAAGTGCTGTTATCGCCATCATCATCATGCTCGCCGTCACG
CCGATCATGGTCTGGAACGTGCGCCGCGCCAACCGCGAACTGAAGGGCCATTGA

Upstream 100 bases:

>100_bases
TTGTGATTGGGCAATACAAACAGATTGACGATGACCGGCGCTGACCCGTCAGAATAACAACCGGTCGCAATAAGATCAGG
GGAAGCAGGGGAGGGACGAA

Downstream 100 bases:

>100_bases
GATGACCGCTGTTGGAAGCTATTTCAAGATCGGCCCCGCCCGTCTCTTCGTTCACGCCGCAGTTCTGTTGATCGTCATCG
TCTGGCTGATCCCGACGCTC

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLLQIVSALGVVVVAVLACSAYFYFSNKILDLALPVKDGDIRAASRNLNRRALVRPWLFVGPALFLLVVYLVYPVVATFI
LSFYDRAGEQFVGVANYQWALGDREFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGAS
VIWKFIYEYRGGNDVQIGLLNAIVQTFGGTPEVWISVPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDG
ANGWQIFWRIMVPQVWGSIAVVWTTITILVLKVFDIVLTMTNGQWQSMVLANLMFNWLFRGGGDSGRSAVIAIIIMLAVT
PIMVWNVRRANRELKGH

Sequences:

>Translated_337_residues
MLLQIVSALGVVVVAVLACSAYFYFSNKILDLALPVKDGDIRAASRNLNRRALVRPWLFVGPALFLLVVYLVYPVVATFI
LSFYDRAGEQFVGVANYQWALGDREFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGAS
VIWKFIYEYRGGNDVQIGLLNAIVQTFGGTPEVWISVPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDG
ANGWQIFWRIMVPQVWGSIAVVWTTITILVLKVFDIVLTMTNGQWQSMVLANLMFNWLFRGGGDSGRSAVIAIIIMLAVT
PIMVWNVRRANRELKGH
>Mature_337_residues
MLLQIVSALGVVVVAVLACSAYFYFSNKILDLALPVKDGDIRAASRNLNRRALVRPWLFVGPALFLLVVYLVYPVVATFI
LSFYDRAGEQFVGVANYQWALGDREFRQSIFNNILWLAVVPAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGAS
VIWKFIYEYRGGNDVQIGLLNAIVQTFGGTPEVWISVPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDG
ANGWQIFWRIMVPQVWGSIAVVWTTITILVLKVFDIVLTMTNGQWQSMVLANLMFNWLFRGGGDSGRSAVIAIIIMLAVT
PIMVWNVRRANRELKGH

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=249, Percent_Identity=26.9076305220884, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37769; Mature: 37769

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQIVSALGVVVVAVLACSAYFYFSNKILDLALPVKDGDIRAASRNLNRRALVRPWLFV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHH
GPALFLLVVYLVYPVVATFILSFYDRAGEQFVGVANYQWALGDREFRQSIFNNILWLAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHH
PAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGASVIWKFIYEYRGGNDVQIGLL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
NAIVQTFGGTPEVWISVPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDG
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEECC
ANGWQIFWRIMVPQVWGSIAVVWTTITILVLKVFDIVLTMTNGQWQSMVLANLMFNWLFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GGGDSGRSAVIAIIIMLAVTPIMVWNVRRANRELKGH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLLQIVSALGVVVVAVLACSAYFYFSNKILDLALPVKDGDIRAASRNLNRRALVRPWLFV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHH
GPALFLLVVYLVYPVVATFILSFYDRAGEQFVGVANYQWALGDREFRQSIFNNILWLAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHH
PAACTFFGLVIAVMTDRIWWGNIAKSIVFMPMAISFVGASVIWKFIYEYRGGNDVQIGLL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
NAIVQTFGGTPEVWISVPFWNNFFLMVILIWIQTGFAMVILSAALRGIPEETIEAAVIDG
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEECC
ANGWQIFWRIMVPQVWGSIAVVWTTITILVLKVFDIVLTMTNGQWQSMVLANLMFNWLFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GGGDSGRSAVIAIIIMLAVTPIMVWNVRRANRELKGH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]