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The map label for this gene is fliR [H]

Identifier: 209547954

GI number: 209547954

Start: 349837

End: 350589

Strand: Direct

Name: fliR [H]

Synonym: Rleg2_0346

Alternate gene names: 209547954

Gene position: 349837-350589 (Clockwise)

Preceding gene: 209547953

Following gene: 209547955

Centisome position: 7.71

GC content: 59.5

Gene sequence:

>753_bases
ATGATAACAGACCCGCAAGGGACCGTTCTCGCGCTGTTTCTGGTTTTCTGCCGGATCGGCGGCTGTGTGCTGGCTCTTCC
GGGTTTTTCCTCGGCGCGCGTGCCCGAACAGCTGCGCGTCTTCATCGCCCTAGCGCTGTCGATCGCCGTCATGCCGCTGC
TCTGGGACACGGTCTATCCGGCCGTCCACACCGGTTCCGGAACCTATATCGGCCTGATCGTCAGCGAATCGCTGATCGGC
GTGATGTACGGCATGCTGGCGCGGATTTACACGCTCGGCATGCAGTTCGCCGCGACGATCATCGCCACCATGGTCGGCTA
TACCCAGCCGGGTTCGGCCGATATCATCGAAGACACGCCGGAGAGCAGCCTTTCCGGCTTCATCACCTTTGCCGGCATCA
TGATCCTCTTCATCATGGACTTCCATCACATCGTCTTTCGGGCGCTGATCGATTCCTACACGACCATGCCCTTCGGTGGC
CTGATGCAGATGCGCGCGACGCTGATCTCCTTTAGCGACACACTGGAGCAGACCACCTACATCATGCTGCGGCTGTCGAG
CCCCTTTCTGATCTACGGCCTGATCTTCAACGTCTCGATCGGCTTCATCAACAAGCTGGCGCCGCAGATCCCGGTCTACT
TCATCTCGACGCCCTATCTGCTGATGGGCGGGCTCTTCCTCGTCTACTTCTCGATTGCGGCCTTGGTCAGCCAGTTCGGC
CAGTCCTTCGGCTCGATCTATATCGGGCGATGA

Upstream 100 bases:

>100_bases
ATGTGCGCATGATCATCGAACGGCTGTTCGCCACGCTGCCGGTCCTGTCGCATGTCGAACTGGCCAAGGGCATCGAGATA
AAGATTTTGGGCTCTATTTC

Downstream 100 bases:

>100_bases
GGCGATGATCGATAAGAACCGCTCCCAGAAGCTCAAGCGACTGCTCTCGGTGCAACGGCATATCGAAAGGATGGCCGAGA
ACGATCTGGCCGAAACCAGC

Product: flagellar biosynthesis protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPEQLRVFIALALSIAVMPLLWDTVYPAVHTGSGTYIGLIVSESLIG
VMYGMLARIYTLGMQFAATIIATMVGYTQPGSADIIEDTPESSLSGFITFAGIMILFIMDFHHIVFRALIDSYTTMPFGG
LMQMRATLISFSDTLEQTTYIMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLLMGGLFLVYFSIAALVSQFG
QSFGSIYIGR

Sequences:

>Translated_250_residues
MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPEQLRVFIALALSIAVMPLLWDTVYPAVHTGSGTYIGLIVSESLIG
VMYGMLARIYTLGMQFAATIIATMVGYTQPGSADIIEDTPESSLSGFITFAGIMILFIMDFHHIVFRALIDSYTTMPFGG
LMQMRATLISFSDTLEQTTYIMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLLMGGLFLVYFSIAALVSQFG
QSFGSIYIGR
>Mature_250_residues
MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPEQLRVFIALALSIAVMPLLWDTVYPAVHTGSGTYIGLIVSESLIG
VMYGMLARIYTLGMQFAATIIATMVGYTQPGSADIIEDTPESSLSGFITFAGIMILFIMDFHHIVFRALIDSYTTMPFGG
LMQMRATLISFSDTLEQTTYIMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLLMGGLFLVYFSIAALVSQFG
QSFGSIYIGR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 27308; Mature: 27308

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPEQLRVFIALALSIAVMPLLWDTVYP
CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
AVHTGSGTYIGLIVSESLIGVMYGMLARIYTLGMQFAATIIATMVGYTQPGSADIIEDTP
CEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ESSLSGFITFAGIMILFIMDFHHIVFRALIDSYTTMPFGGLMQMRATLISFSDTLEQTTY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE
IMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLLMGGLFLVYFSIAALVSQFG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
QSFGSIYIGR
HHHCCEECCC
>Mature Secondary Structure
MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPEQLRVFIALALSIAVMPLLWDTVYP
CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
AVHTGSGTYIGLIVSESLIGVMYGMLARIYTLGMQFAATIIATMVGYTQPGSADIIEDTP
CEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
ESSLSGFITFAGIMILFIMDFHHIVFRALIDSYTTMPFGGLMQMRATLISFSDTLEQTTY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHE
IMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLLMGGLFLVYFSIAALVSQFG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
QSFGSIYIGR
HHHCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]