Click here to switch to the map view.

The map label for this gene is flbT [H]

Identifier: 209547950

GI number: 209547950

Start: 346427

End: 346876

Strand: Direct

Name: flbT [H]

Synonym: Rleg2_0342

Alternate gene names: 209547950

Gene position: 346427-346876 (Clockwise)

Preceding gene: 209547949

Following gene: 209547951

Centisome position: 7.63

GC content: 56.67

Gene sequence:

>450_bases
ATGAAAAGTACACTTCGCATTTCTCTGAAAGCCGGAGAAAGAATCTTCATCAACGGCGCCGTCCTGCGTGTCGACCGCAA
GGTCGCGCTGGAATTCCTGAATGATGTGACGTTCCTTCTCGAAAACCACGTCCTTCAGCCGGAAGGCGCCACCACGCCGC
TGCGTCAGCTCTATTTCATCGCGCAGATGATCCTCATCAATCCCGAGGGCAAGGACCACTCGACGGCCATGTTCCGCAAG
TCGATCACCATGCTGCTCAGCTGCTTCAAAAACGAGGAAATCCTCGCCGAACTGAAGCGCATCGATGCACTCGTCTCGAC
CGGCCGCGCCTTCGACGCGCTGAAGGCGATCCGCGGCCTCTACGCGATCGAAGACAATATCCTCAACAACCACGAAATGC
CGCCGACAATGGTCGAGCAGATTCGCAGGGAGATTGCACCATGGCGGTAG

Upstream 100 bases:

>100_bases
CGATCTGGATTTTGAAGGAATGCGACAGGATCCGAAAACGTCTGTCGAATAATTACCAGGGCATCATCGACGTTACCACC
ATCATCAGGGATGGACTTAA

Downstream 100 bases:

>100_bases
ATGCAACATCGAGCGTGACCTCGGCGGGCACCACGAGCACGACAAATTCCGCCCAGCAGAAAGCGACGCTGAACTACGAC
AATTTCCTTCAGTTGCTCAT

Product: flagellar biosynthesis repressor FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKSTLRISLKAGERIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPEGATTPLRQLYFIAQMILINPEGKDHSTAMFRK
SITMLLSCFKNEEILAELKRIDALVSTGRAFDALKAIRGLYAIEDNILNNHEMPPTMVEQIRREIAPWR

Sequences:

>Translated_149_residues
MKSTLRISLKAGERIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPEGATTPLRQLYFIAQMILINPEGKDHSTAMFRK
SITMLLSCFKNEEILAELKRIDALVSTGRAFDALKAIRGLYAIEDNILNNHEMPPTMVEQIRREIAPWR
>Mature_149_residues
MKSTLRISLKAGERIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPEGATTPLRQLYFIAQMILINPEGKDHSTAMFRK
SITMLLSCFKNEEILAELKRIDALVSTGRAFDALKAIRGLYAIEDNILNNHEMPPTMVEQIRREIAPWR

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation [H]

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009967
- InterPro:   IPR016006 [H]

Pfam domain/function: PF07378 FlbT [H]

EC number: NA

Molecular weight: Translated: 17036; Mature: 17036

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTLRISLKAGERIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPEGATTPLRQLYFI
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGKDHSTAMFRKSITMLLSCFKNEEILAELKRIDALVSTGRAFDALKAIRGL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YAIEDNILNNHEMPPTMVEQIRREIAPWR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSTLRISLKAGERIFINGAVLRVDRKVALEFLNDVTFLLENHVLQPEGATTPLRQLYFI
CCCCEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGKDHSTAMFRKSITMLLSCFKNEEILAELKRIDALVSTGRAFDALKAIRGL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
YAIEDNILNNHEMPPTMVEQIRREIAPWR
HHHHHHHCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA