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The map label for this gene is flgH [H]

Identifier: 209547932

GI number: 209547932

Start: 326776

End: 327492

Strand: Direct

Name: flgH [H]

Synonym: Rleg2_0324

Alternate gene names: 209547932

Gene position: 326776-327492 (Clockwise)

Preceding gene: 209547931

Following gene: 209547933

Centisome position: 7.2

GC content: 61.37

Gene sequence:

>717_bases
ATGAATATGCGTTTCCCGGCCGCGATCGCCGTCCTCGCACTCCTTGCAGGTTGCCAGTCACCGACGGCAGTCAGCGAGAT
CGGCCGCGCGCCCTCCATGAGCCCGATCGGCAGCGGTCTTGCCTACGGTCAGACGCCGCAGATGGCGCTTTATCCGAAGC
AGCCGCGCGCCGTGGCGCAGGGTTATTCGCTGTGGAGCGATTCACAGGCGGCGCTCTTCAAGGATGCGCGCGCGCTCAAT
GTCGGCGACATCCTGACCGTCGACATCCAGATCAACGACAAGGGCTCGTTCGATAACGAGACCAACCGCAGCCGCAAGAA
TTCAAGTGGCATGAATTGGGACGTCAACGCCCAGATCTTCGGCTGGACGCCCGAGTCCAAGACTGACCTGACCTATGGTT
CCGACACCAGCACCGACGGCAAGGGCAAGATCGAGCGCACCGACAAACTGACCCTTCTGGTTGCCGCCGTCGTCACCGGC
ATTCTCGAAAACGGCAACCTCGTCATATCGGGCTCGCAGGAAGTCCGATTGAACCAGGAACTGCGTATCCTGAACGTTGC
CGGTATCGTTCGCCCGCAGGACGTCAATGCCGAAAACCAAATCTCCTACGACAAGATCGCCGAAGCCCGCATCTCCTATG
GTGGCCGCGGCCGCCTGATGGAAGTGCAGCAGCCTCCGCGCGGCCAGCAGGCCGTCGATCTTTTCTCGCCGCTTTGA

Upstream 100 bases:

>100_bases
AGTCGAGCCTCATCCTCAACGAGATGGACCCGAAGAAGGCCGCGGCCATCGCCAGCGTCATCGCCAGTGCGTCCGATCCC
AATACGTCGAAGGATCCTTC

Downstream 100 bases:

>100_bases
GGCTGAACGACGATGGCAGAGCCAGACGCAAGCGCAGGTCAACCGAAGAAGAAATCCGGCACCCTGATGATGATCATCGG
CATCGCTGTCCTGACGCTGC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNMRFPAAIAVLALLAGCQSPTAVSEIGRAPSMSPIGSGLAYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKDARALN
VGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIFGWTPESKTDLTYGSDTSTDGKGKIERTDKLTLLVAAVVTG
ILENGNLVISGSQEVRLNQELRILNVAGIVRPQDVNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL

Sequences:

>Translated_238_residues
MNMRFPAAIAVLALLAGCQSPTAVSEIGRAPSMSPIGSGLAYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKDARALN
VGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIFGWTPESKTDLTYGSDTSTDGKGKIERTDKLTLLVAAVVTG
ILENGNLVISGSQEVRLNQELRILNVAGIVRPQDVNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL
>Mature_238_residues
MNMRFPAAIAVLALLAGCQSPTAVSEIGRAPSMSPIGSGLAYGQTPQMALYPKQPRAVAQGYSLWSDSQAALFKDARALN
VGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIFGWTPESKTDLTYGSDTSTDGKGKIERTDKLTLLVAAVVTG
ILENGNLVISGSQEVRLNQELRILNVAGIVRPQDVNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=176, Percent_Identity=28.4090909090909, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25685; Mature: 25685

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMRFPAAIAVLALLAGCQSPTAVSEIGRAPSMSPIGSGLAYGQTPQMALYPKQPRAVAQ
CCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHH
GYSLWSDSQAALFKDARALNVGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIF
CCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEE
GWTPESKTDLTYGSDTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQE
EECCCCCCCEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCC
LRILNVAGIVRPQDVNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL
EEEEEEECEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MNMRFPAAIAVLALLAGCQSPTAVSEIGRAPSMSPIGSGLAYGQTPQMALYPKQPRAVAQ
CCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHH
GYSLWSDSQAALFKDARALNVGDILTVDIQINDKGSFDNETNRSRKNSSGMNWDVNAQIF
CCCCCCCCCHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECEEEE
GWTPESKTDLTYGSDTSTDGKGKIERTDKLTLLVAAVVTGILENGNLVISGSQEVRLNQE
EECCCCCCCEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCEEEECCCCEEECCC
LRILNVAGIVRPQDVNAENQISYDKIAEARISYGGRGRLMEVQQPPRGQQAVDLFSPL
EEEEEEECEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194 [H]