Click here to switch to the map view.

The map label for this gene is fliM [H]

Identifier: 209547920

GI number: 209547920

Start: 317642

End: 318592

Strand: Reverse

Name: fliM [H]

Synonym: Rleg2_0312

Alternate gene names: 209547920

Gene position: 318592-317642 (Counterclockwise)

Preceding gene: 209547921

Following gene: 209547919

Centisome position: 7.02

GC content: 60.25

Gene sequence:

>951_bases
ATGACCATGAGCAATGCTTCGCACGACAAACCGGCAATGGATCCTGCCCTTCTCGCCAAGCTGACCGGCGGGCTCGGCGA
CAAAGGCAGGGTCGCCAAGATCTGCAGTTCCTTCGGGGAAATTTACAGCGAATTCTTTCCCGACGTCATCAAGAGCGAGA
CCGGCCTCGAGGTGACGGTCAACTATCTCGGCTGCGAGATCGGCTACAAGAACCACCTGATCGACGACCTGAGCTCGAAC
GTCACGCTCGTCGACGTGACGCTGCGAAACTGGTCGCAGAACATCACGATTGCCTGCGGCAACGGTTTCGTCATTACGCT
GATGGAGCACCTGCTCGGCGCCACCGCCGATACGATCGAGGAGCCGGCCGACCGGCTGCTGTCGATTATCGAGATGGACC
TGGCGGTCATGGTTTTCGACAAGATCGCCAAGGTGCTGCGCTCGGCCGTCAACGCGCCCGGCGGTTTCGAACCGAGCCTT
TCGGTCCCGCACGCCCTTGAGATGCGCGCCCGGCCGCCGGAGGACCGACCGGACGAATTCGCCGCCGCCATCAATATGTC
GATCACGCTTGCCGGCATCGTGTCGGAATTTTCTTTGATGGTTCCGCAGACGGCGCTGCTGAAGACCAAGGTGACGCCGC
CGAAGCCGAAGCGCCAGGCCGGCGGCAGCTCGGCGGAATGGACCGAACAGCTCGGCGACCAGGTCCGCCGCTCGCATGTC
ACGCTCGAGGCCAAGATCAGGCTGCAGGACCTGACATTGCGCACGATCTCGAAGCTGATGGTCGGCGATGTCATTCCGTT
CCGTGACCATGGCGACGTGCGCGTCGAGGTCAGCGCCAACAGCAAGGAATTGTATGTGTGCGAGTTCGGGCGTTCAGGCG
AAAATTACATGGTCCGCGTCAAGGATACGATGAACTCGGATGACGAACTCATCCGTCATTTAATGAATTAA

Upstream 100 bases:

>100_bases
CGAATACGGCCGCAAGACGATCTCGGCTTACGAGCGTCCGTCCATCGATGCGGTCGAACAGGAAATGATGAACCCAGGCG
GCGAAAACAAGGCGGCTTAA

Downstream 100 bases:

>100_bases
TCGGTTCTCTGGCTTTCGGGCTGCAAAGGCAGTTTGAGGCAAGTTTCAACTGGAATAGTGATTTCATGGCTACGAAGAAA
ACACAGCAGAACAGAGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTMSNASHDKPAMDPALLAKLTGGLGDKGRVAKICSSFGEIYSEFFPDVIKSETGLEVTVNYLGCEIGYKNHLIDDLSSN
VTLVDVTLRNWSQNITIACGNGFVITLMEHLLGATADTIEEPADRLLSIIEMDLAVMVFDKIAKVLRSAVNAPGGFEPSL
SVPHALEMRARPPEDRPDEFAAAINMSITLAGIVSEFSLMVPQTALLKTKVTPPKPKRQAGGSSAEWTEQLGDQVRRSHV
TLEAKIRLQDLTLRTISKLMVGDVIPFRDHGDVRVEVSANSKELYVCEFGRSGENYMVRVKDTMNSDDELIRHLMN

Sequences:

>Translated_316_residues
MTMSNASHDKPAMDPALLAKLTGGLGDKGRVAKICSSFGEIYSEFFPDVIKSETGLEVTVNYLGCEIGYKNHLIDDLSSN
VTLVDVTLRNWSQNITIACGNGFVITLMEHLLGATADTIEEPADRLLSIIEMDLAVMVFDKIAKVLRSAVNAPGGFEPSL
SVPHALEMRARPPEDRPDEFAAAINMSITLAGIVSEFSLMVPQTALLKTKVTPPKPKRQAGGSSAEWTEQLGDQVRRSHV
TLEAKIRLQDLTLRTISKLMVGDVIPFRDHGDVRVEVSANSKELYVCEFGRSGENYMVRVKDTMNSDDELIRHLMN
>Mature_315_residues
TMSNASHDKPAMDPALLAKLTGGLGDKGRVAKICSSFGEIYSEFFPDVIKSETGLEVTVNYLGCEIGYKNHLIDDLSSNV
TLVDVTLRNWSQNITIACGNGFVITLMEHLLGATADTIEEPADRLLSIIEMDLAVMVFDKIAKVLRSAVNAPGGFEPSLS
VPHALEMRARPPEDRPDEFAAAINMSITLAGIVSEFSLMVPQTALLKTKVTPPKPKRQAGGSSAEWTEQLGDQVRRSHVT
LEAKIRLQDLTLRTISKLMVGDVIPFRDHGDVRVEVSANSKELYVCEFGRSGENYMVRVKDTMNSDDELIRHLMN

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 34692; Mature: 34561

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSNASHDKPAMDPALLAKLTGGLGDKGRVAKICSSFGEIYSEFFPDVIKSETGLEVTV
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
NYLGCEIGYKNHLIDDLSSNVTLVDVTLRNWSQNITIACGNGFVITLMEHLLGATADTIE
EEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCHHHHH
EPADRLLSIIEMDLAVMVFDKIAKVLRSAVNAPGGFEPSLSVPHALEMRARPPEDRPDEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHH
AAAINMSITLAGIVSEFSLMVPQTALLKTKVTPPKPKRQAGGSSAEWTEQLGDQVRRSHV
HHHHHHHEEHHHHHHHHHHHCCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHE
TLEAKIRLQDLTLRTISKLMVGDVIPFRDHGDVRVEVSANSKELYVCEFGRSGENYMVRV
EEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEE
KDTMNSDDELIRHLMN
ECCCCCHHHHHHHHCC
>Mature Secondary Structure 
TMSNASHDKPAMDPALLAKLTGGLGDKGRVAKICSSFGEIYSEFFPDVIKSETGLEVTV
CCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
NYLGCEIGYKNHLIDDLSSNVTLVDVTLRNWSQNITIACGNGFVITLMEHLLGATADTIE
EEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCHHHHH
EPADRLLSIIEMDLAVMVFDKIAKVLRSAVNAPGGFEPSLSVPHALEMRARPPEDRPDEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHH
AAAINMSITLAGIVSEFSLMVPQTALLKTKVTPPKPKRQAGGSSAEWTEQLGDQVRRSHV
HHHHHHHEEHHHHHHHHHHHCCCHHHHEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHE
TLEAKIRLQDLTLRTISKLMVGDVIPFRDHGDVRVEVSANSKELYVCEFGRSGENYMVRV
EEEEEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEE
KDTMNSDDELIRHLMN
ECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161425; 11743193; 11743194 [H]