Click here to switch to the map view.

The map label for this gene is 209547881

Identifier: 209547881

GI number: 209547881

Start: 277328

End: 278473

Strand: Direct

Name: 209547881

Synonym: Rleg2_0273

Alternate gene names: NA

Gene position: 277328-278473 (Clockwise)

Preceding gene: 209547880

Following gene: 209547883

Centisome position: 6.11

GC content: 57.68

Gene sequence:

>1146_bases
ATGCCCGCCATCCTGCGAAAGAAAATTCACGGCGCCGCGACAAGGGGACAGGTCATCGATGGGGCTGCCGATGTCGGCGT
CGCCTATCAGGTGTTTTCCGATACGGTGGTCGAGGACGTGATCGTCAAGAATTCACCGCGCGGCTTCAAATTTCACAATG
GCTGGAACCTCATCGTCAGGCGTTGTGAAACGGAGAATGTGAACGGCGACGGCATTTATCTCACGAAGACGACGCATGTG
TTGCTGGAGAACAACCGGATCGCCGCGGCACCGGGGGAAGGTGCAGACTGCTGCCAGTTCGCCTACCAAAACAGCGACGA
CAATATCAGCTCCGATATCACGATCCGCGGCAACCTCTTCCTTCAGTCGCCGACGAGCACGTCGAACAAGGGTGCGCTGG
TCTGCGACAAAACAAGACGATACCTTGTCGAATACAACTTCATCGGCGGCAAGAATTTTTCCTTTTCGTCGATCGGCGAT
GATGCCGTCGTGCGCAGCAACATCATGCGCGACGGCAGGATGAATGACTATTCCTTCGGCTACGGCATCGGCGACAAGGC
CGACCACAACGGCCACCACGTCTATGACAACTGGATCGAGAACACCAATCGCGGCATCAGCCTGAGCGGTTTTTCGGATC
AGGAACAGGCGTTCCGCAAAGACATCGATATCCACGACAACGTCATCAGCCAGTGCGACATCGCATTCTTCGCCAATCGT
CCGTGGTCCGGCAGCGTCCGGCGCAACATATTCCTGCGCTGCAAGGAGGACATCGTTCTGAAGGGAAAGGGCAAAGCGAC
GGCGGGCGATGTCGACGGCAATTATTCCAATGACGGCAGCTTTCTGAACGTCACCCCGCCGCCGCTTGTCTTCAAGCCCG
ACGGCAAAGCGTCTGTTTCGTCGGGCCAATGGTCATCGGAGCCCGATGAGATCCGTATCCAGTGGCGTGACAAGGGGATC
GATATACCAGGCGCCAACCGGCCCTCCATCGCCGCGGCGCCCGGTATGGAATTGTCCTGCGTGCTGCTGGCCCGCAAGGG
GCAGAATTGGATGCTGGCGATCGCCGAGACTGTCTATGACGATTTCACGCCGCGCGCATGGCAGGAGCATAGGCTGCCTT
GGCAGAAGCGCTATCTCTCGATTTAA

Upstream 100 bases:

>100_bases
ACACAGCATGTGATCGGGAGTAGATGATTTCCGAATATTCAAACATCCGCCACACCGCGTCTGCTTAAATCCCGCTGCAC
CGCTATCGAAGGGAAACGCC

Downstream 100 bases:

>100_bases
ATCGCCCGGCACGCCGCGGTGTGAGCGCTCTCCTCGCCAAGACACCGAGCACGTCTTCCCATTATGTCTGGTGTAGATTC
CGATTTGTCCGCAACCTGGG

Product: polysaccharidase protein

Products: NA

Alternate protein names: Polysaccharidase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPAILRKKIHGAATRGQVIDGAADVGVAYQVFSDTVVEDVIVKNSPRGFKFHNGWNLIVRRCETENVNGDGIYLTKTTHV
LLENNRIAAAPGEGADCCQFAYQNSDDNISSDITIRGNLFLQSPTSTSNKGALVCDKTRRYLVEYNFIGGKNFSFSSIGD
DAVVRSNIMRDGRMNDYSFGYGIGDKADHNGHHVYDNWIENTNRGISLSGFSDQEQAFRKDIDIHDNVISQCDIAFFANR
PWSGSVRRNIFLRCKEDIVLKGKGKATAGDVDGNYSNDGSFLNVTPPPLVFKPDGKASVSSGQWSSEPDEIRIQWRDKGI
DIPGANRPSIAAAPGMELSCVLLARKGQNWMLAIAETVYDDFTPRAWQEHRLPWQKRYLSI

Sequences:

>Translated_381_residues
MPAILRKKIHGAATRGQVIDGAADVGVAYQVFSDTVVEDVIVKNSPRGFKFHNGWNLIVRRCETENVNGDGIYLTKTTHV
LLENNRIAAAPGEGADCCQFAYQNSDDNISSDITIRGNLFLQSPTSTSNKGALVCDKTRRYLVEYNFIGGKNFSFSSIGD
DAVVRSNIMRDGRMNDYSFGYGIGDKADHNGHHVYDNWIENTNRGISLSGFSDQEQAFRKDIDIHDNVISQCDIAFFANR
PWSGSVRRNIFLRCKEDIVLKGKGKATAGDVDGNYSNDGSFLNVTPPPLVFKPDGKASVSSGQWSSEPDEIRIQWRDKGI
DIPGANRPSIAAAPGMELSCVLLARKGQNWMLAIAETVYDDFTPRAWQEHRLPWQKRYLSI
>Mature_380_residues
PAILRKKIHGAATRGQVIDGAADVGVAYQVFSDTVVEDVIVKNSPRGFKFHNGWNLIVRRCETENVNGDGIYLTKTTHVL
LENNRIAAAPGEGADCCQFAYQNSDDNISSDITIRGNLFLQSPTSTSNKGALVCDKTRRYLVEYNFIGGKNFSFSSIGDD
AVVRSNIMRDGRMNDYSFGYGIGDKADHNGHHVYDNWIENTNRGISLSGFSDQEQAFRKDIDIHDNVISQCDIAFFANRP
WSGSVRRNIFLRCKEDIVLKGKGKATAGDVDGNYSNDGSFLNVTPPPLVFKPDGKASVSSGQWSSEPDEIRIQWRDKGID
IPGANRPSIAAAPGMELSCVLLARKGQNWMLAIAETVYDDFTPRAWQEHRLPWQKRYLSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42309; Mature: 42178

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAILRKKIHGAATRGQVIDGAADVGVAYQVFSDTVVEDVIVKNSPRGFKFHNGWNLIVR
CCHHHHHHHCCCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEECCCEEEEE
RCETENVNGDGIYLTKTTHVLLENNRIAAAPGEGADCCQFAYQNSDDNISSDITIRGNLF
EECCCCCCCCEEEEEEEEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEEE
LQSPTSTSNKGALVCDKTRRYLVEYNFIGGKNFSFSSIGDDAVVRSNIMRDGRMNDYSFG
EECCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
YGIGDKADHNGHHVYDNWIENTNRGISLSGFSDQEQAFRKDIDIHDNVISQCDIAFFANR
CCCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCHHHHHHHCCCCCHHHHHHCCEEEEECC
PWSGSVRRNIFLRCKEDIVLKGKGKATAGDVDGNYSNDGSFLNVTPPPLVFKPDGKASVS
CCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCC
SGQWSSEPDEIRIQWRDKGIDIPGANRPSIAAAPGMELSCVLLARKGQNWMLAIAETVYD
CCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEHHHHH
DFTPRAWQEHRLPWQKRYLSI
CCCCCCHHHHCCCHHHHHCCC
>Mature Secondary Structure 
PAILRKKIHGAATRGQVIDGAADVGVAYQVFSDTVVEDVIVKNSPRGFKFHNGWNLIVR
CHHHHHHHCCCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEECCCEEEEE
RCETENVNGDGIYLTKTTHVLLENNRIAAAPGEGADCCQFAYQNSDDNISSDITIRGNLF
EECCCCCCCCEEEEEEEEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEEE
LQSPTSTSNKGALVCDKTRRYLVEYNFIGGKNFSFSSIGDDAVVRSNIMRDGRMNDYSFG
EECCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
YGIGDKADHNGHHVYDNWIENTNRGISLSGFSDQEQAFRKDIDIHDNVISQCDIAFFANR
CCCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCHHHHHHHCCCCCHHHHHHCCEEEEECC
PWSGSVRRNIFLRCKEDIVLKGKGKATAGDVDGNYSNDGSFLNVTPPPLVFKPDGKASVS
CCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCCCCCCC
SGQWSSEPDEIRIQWRDKGIDIPGANRPSIAAAPGMELSCVLLARKGQNWMLAIAETVYD
CCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCEEEEEEHHHHH
DFTPRAWQEHRLPWQKRYLSI
CCCCCCHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA