| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209547831
Identifier: 209547831
GI number: 209547831
Start: 225833
End: 227026
Strand: Reverse
Name: 209547831
Synonym: Rleg2_0222
Alternate gene names: NA
Gene position: 227026-225833 (Counterclockwise)
Preceding gene: 209547833
Following gene: 209547827
Centisome position: 5.0
GC content: 65.75
Gene sequence:
>1194_bases ATGGTCACCGCAGCCAAATCCACAGAGAATGCGCAGCAGCCCTCGATCAGTTTCCATGCGCTGACGCTCGCCGCCTTTTT CGGCGCCTCCGCGGCGCCGACGCCGCTCTACCGGATCTATCAGGAAAACTTCTCGCTCTCGCCGGTGCTGATCACGGTGG TCTTTGCCGTCTACGCTTTTGCGCTGCTGGCAGCGCTGCTGACCGCCGGTTCGCTCTCGGATCATCTCGGCCGCAAGCCG GTGATCTTTTTCGCCCTGGTGCTCGAGATCGTCGCCATGGGCCTCTTCGTCGTCGCCAGCGGCCCCGGCTGGCTGATTGC GGCGCGGATCGTTCAGGGTATTGCGACCGGGATCGCCGGCGCCTCGCTCGGCGCCGCTCTCGTCGATGTCGACCGGGCAA AGGGGCAGATCGTCAATTCGATCGCGCCGCTTTGCGGCATGGCGGTTGGTGCGGTCGGCACCAGCGCCCTGATCCAATAC GGCCCCTTCCCGATGCATCTGACCTATGCGCTGCTGCTTCTCGCCTTCACGCTGCTGGCGGCCGCGATCTGGCTGACGCA CGAGACCGGCGGCACGCGGCCGGGCGCCCTCGGCTCGCTGATCCCGAGAGTCGCCATTCCCGCGCACGCGAAGCGGCCGC TGTCGCTGGTGACGCCGATCAACATCGCCAACTGGACGCTCGCCGGCTTCTATCTTTCGCTGGTCCCATCGCTGGTCGCC AGCACCACCGGCAGCAGCGCGCCACTGACCGGCGGGGCCGTCGTGACTGCGCTGATGGCGAGTGGAGCGATCACCGTCTA TCTCAGGCGCGTCAAGTCGGCCTCGGCCAATCTCGGCTTCGGCGTGTCGGCCAAGACGCTCGGCATTCTGACGGTCGTTG CCGGCGTGCATCTCGCCAATGTGCCGCTGCTGCTCATCGGCACGGTCTTCACCGGCGCCGGTTTCGGCACCAATTTCCTC GGCTCGATCGGCACCATCATGCCGCTCGCCAAGGCGGATGAACGGGCCGGGCTGCTGTCGGTCTTCTACATCCAGAGCTA TCTCGCCTTCAGCCTGCCAGCGATCCTTGCCGGGTTCCTGGCGAAATCGGCCGGTTATGCACTGACGACAGATATCTATG CGACTGTAATTCTGCTGTTGATGGGCGCCGGACTGCTGGGGCTTCGCGCCGGACGGCGGAAAGCGGCGGCCTGA
Upstream 100 bases:
>100_bases AAAATCTTTGACAGAACCATAAACGCAAAGAATTTGCCTTTACGATGCATTCGCCCTACATGGAACTAACGCAATGGTTT AGCTTTAAGAGGGCTTATAT
Downstream 100 bases:
>100_bases GGACGGCCGCCGTAATCACCCATGGAGGGCATTCGTCACCGTTCCGTTGAACGGATCGGCTCAGAAATCCTCCCAGCCGT GGTCGGCCGGAGCGGCCGCC
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Mutlidrug Resistance Protein; Drug Resistance Efflux Protein; Facilitator Superfamily; Drug Efflux Protein; Multidrug Resistance Protein; Facilitator Superfamily Transporter Permease; Mfs Transporter; ABC Transporter Membrane Protein; Transmembrane Efflux Protein; Multidrug ABC Transporter; Multidrug Efflux Protein; Multi-Drug Efflux Transporter; Facilitator Superfamily Multidrug Efflux Transporter; General Substrate Transporter; Facilitator Superfamily Multidrug Resistance Protein; Facilitator Family Protein; Multidrug-Efflux MFS Permease; Facilitator Superfamily Permease
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MVTAAKSTENAQQPSISFHALTLAAFFGASAAPTPLYRIYQENFSLSPVLITVVFAVYAFALLAALLTAGSLSDHLGRKP VIFFALVLEIVAMGLFVVASGPGWLIAARIVQGIATGIAGASLGAALVDVDRAKGQIVNSIAPLCGMAVGAVGTSALIQY GPFPMHLTYALLLLAFTLLAAAIWLTHETGGTRPGALGSLIPRVAIPAHAKRPLSLVTPINIANWTLAGFYLSLVPSLVA STTGSSAPLTGGAVVTALMASGAITVYLRRVKSASANLGFGVSAKTLGILTVVAGVHLANVPLLLIGTVFTGAGFGTNFL GSIGTIMPLAKADERAGLLSVFYIQSYLAFSLPAILAGFLAKSAGYALTTDIYATVILLLMGAGLLGLRAGRRKAAA
Sequences:
>Translated_397_residues MVTAAKSTENAQQPSISFHALTLAAFFGASAAPTPLYRIYQENFSLSPVLITVVFAVYAFALLAALLTAGSLSDHLGRKP VIFFALVLEIVAMGLFVVASGPGWLIAARIVQGIATGIAGASLGAALVDVDRAKGQIVNSIAPLCGMAVGAVGTSALIQY GPFPMHLTYALLLLAFTLLAAAIWLTHETGGTRPGALGSLIPRVAIPAHAKRPLSLVTPINIANWTLAGFYLSLVPSLVA STTGSSAPLTGGAVVTALMASGAITVYLRRVKSASANLGFGVSAKTLGILTVVAGVHLANVPLLLIGTVFTGAGFGTNFL GSIGTIMPLAKADERAGLLSVFYIQSYLAFSLPAILAGFLAKSAGYALTTDIYATVILLLMGAGLLGLRAGRRKAAA >Mature_397_residues MVTAAKSTENAQQPSISFHALTLAAFFGASAAPTPLYRIYQENFSLSPVLITVVFAVYAFALLAALLTAGSLSDHLGRKP VIFFALVLEIVAMGLFVVASGPGWLIAARIVQGIATGIAGASLGAALVDVDRAKGQIVNSIAPLCGMAVGAVGTSALIQY GPFPMHLTYALLLLAFTLLAAAIWLTHETGGTRPGALGSLIPRVAIPAHAKRPLSLVTPINIANWTLAGFYLSLVPSLVA STTGSSAPLTGGAVVTALMASGAITVYLRRVKSASANLGFGVSAKTLGILTVVAGVHLANVPLLLIGTVFTGAGFGTNFL GSIGTIMPLAKADERAGLLSVFYIQSYLAFSLPAILAGFLAKSAGYALTTDIYATVILLLMGAGLLGLRAGRRKAAA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40519; Mature: 40519
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTAAKSTENAQQPSISFHALTLAAFFGASAAPTPLYRIYQENFSLSPVLITVVFAVYAF CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH ALLAALLTAGSLSDHLGRKPVIFFALVLEIVAMGLFVVASGPGWLIAARIVQGIATGIAG HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH ASLGAALVDVDRAKGQIVNSIAPLCGMAVGAVGTSALIQYGPFPMHLTYALLLLAFTLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAIWLTHETGGTRPGALGSLIPRVAIPAHAKRPLSLVTPINIANWTLAGFYLSLVPSLVA HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH STTGSSAPLTGGAVVTALMASGAITVYLRRVKSASANLGFGVSAKTLGILTVVAGVHLAN HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC VPLLLIGTVFTGAGFGTNFLGSIGTIMPLAKADERAGLLSVFYIQSYLAFSLPAILAGFL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKSAGYALTTDIYATVILLLMGAGLLGLRAGRRKAAA HHCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCHHCCC >Mature Secondary Structure MVTAAKSTENAQQPSISFHALTLAAFFGASAAPTPLYRIYQENFSLSPVLITVVFAVYAF CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH ALLAALLTAGSLSDHLGRKPVIFFALVLEIVAMGLFVVASGPGWLIAARIVQGIATGIAG HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHH ASLGAALVDVDRAKGQIVNSIAPLCGMAVGAVGTSALIQYGPFPMHLTYALLLLAFTLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AAIWLTHETGGTRPGALGSLIPRVAIPAHAKRPLSLVTPINIANWTLAGFYLSLVPSLVA HHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH STTGSSAPLTGGAVVTALMASGAITVYLRRVKSASANLGFGVSAKTLGILTVVAGVHLAN HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC VPLLLIGTVFTGAGFGTNFLGSIGTIMPLAKADERAGLLSVFYIQSYLAFSLPAILAGFL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKSAGYALTTDIYATVILLLMGAGLLGLRAGRRKAAA HHCCCCEEHHHHHHHHHHHHHCCCHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA