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The map label for this gene is yjjM [H]

Identifier: 209547767

GI number: 209547767

Start: 152234

End: 153133

Strand: Direct

Name: yjjM [H]

Synonym: Rleg2_0156

Alternate gene names: 209547767

Gene position: 152234-153133 (Clockwise)

Preceding gene: 209547766

Following gene: 209547768

Centisome position: 3.35

GC content: 62.67

Gene sequence:

>900_bases
GTGGCAAGGCAGAATACGGTCTTCAAGGAAGCCTACAACAGGTATGCCGTGGCCCTGCGCACGGATACCGCACTGCCCTC
CGAGCCGGAGATCGCCGCCCAACTCGGCGTCAGCCGCTCCACCGCGCGCGCCATCCTGACCCGCCTCAGCGAGGAAGGCA
TCATCCGCTGGAACAAGCGCCAGAAGACCGTGCTGCGCCAACCCACAGACCGCGACCTCTTTCCCTCCGAAGAAACCGAC
TCCCTGCATGACATCATCGAGCGCAGCTTCATGCAGCGCATCCTTGCCGATGATGCCGCCCCCGGCATGCAGATCAACGA
GCTGGAGCTTGCCCGCGAGATCGGCACCGGCACGACAAGCGTGCGCGAGTTCCTGATCCGCTTCTCCCGCTTCGGCCTCA
TCGAGAAACGGCCGAACAGCCACTGGACGCTGAAAGGTTTTACCCGCGAATTCGCCCTCGAACTGGCCGATGTGCGCGAG
ATGTTCGAGCTGCATTCCGCCGCCGAATTCGGCCGGCTTGCCAGGGACAGCCAGGCCTGGATCGATCTTGCCGCCATCCG
CGACGAACATCACGCCATGCTTGCCGACATCAACCAGCGCTTCAAGGATTTCTCCGTCCTCGACGAACGCTTCCACCTGC
TGATCCACCGCGCCTCGAAGAACCGCTTCATCGCCGATTTCTACGACGCCATCGCCATCGTCTTCCACTATCATTACCAG
TGGAACAAGACCGCCGCCCGCGAACGCAACGAACGCGCCATCCACGAGCATCTGGATTACATCGCAGCGCTTGAATCCGG
CGACCAGACCGCCATCGAGAAAGCCTGCCGCATCCACCTGCGCTCCGCCCGCCAGACCCTCCTGCAATCCCTGCCGCAGA
TGGCGACTGAGGGTGCGTAA

Upstream 100 bases:

>100_bases
CAGGCGACTGGAAATAAGCTAAAGGTCGTTTGAACAAGCCCCGGTCTAATTGCCCTGCTTTGCAGAGGCGGTGGGCACGA
GGGCGGAAAGCGGGGGTCTG

Downstream 100 bases:

>100_bases
GTGAAGGGTGACGAAAGCGTGTGCCGTGCGGCCCCCTCATCCGACCCTTCGGGCCACCTTCTCCCCGAGGGAAGAAGAGG
GAGCAAGGCGCGCCGACAAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MARQNTVFKEAYNRYAVALRTDTALPSEPEIAAQLGVSRSTARAILTRLSEEGIIRWNKRQKTVLRQPTDRDLFPSEETD
SLHDIIERSFMQRILADDAAPGMQINELELAREIGTGTTSVREFLIRFSRFGLIEKRPNSHWTLKGFTREFALELADVRE
MFELHSAAEFGRLARDSQAWIDLAAIRDEHHAMLADINQRFKDFSVLDERFHLLIHRASKNRFIADFYDAIAIVFHYHYQ
WNKTAARERNERAIHEHLDYIAALESGDQTAIEKACRIHLRSARQTLLQSLPQMATEGA

Sequences:

>Translated_299_residues
MARQNTVFKEAYNRYAVALRTDTALPSEPEIAAQLGVSRSTARAILTRLSEEGIIRWNKRQKTVLRQPTDRDLFPSEETD
SLHDIIERSFMQRILADDAAPGMQINELELAREIGTGTTSVREFLIRFSRFGLIEKRPNSHWTLKGFTREFALELADVRE
MFELHSAAEFGRLARDSQAWIDLAAIRDEHHAMLADINQRFKDFSVLDERFHLLIHRASKNRFIADFYDAIAIVFHYHYQ
WNKTAARERNERAIHEHLDYIAALESGDQTAIEKACRIHLRSARQTLLQSLPQMATEGA
>Mature_298_residues
ARQNTVFKEAYNRYAVALRTDTALPSEPEIAAQLGVSRSTARAILTRLSEEGIIRWNKRQKTVLRQPTDRDLFPSEETDS
LHDIIERSFMQRILADDAAPGMQINELELAREIGTGTTSVREFLIRFSRFGLIEKRPNSHWTLKGFTREFALELADVREM
FELHSAAEFGRLARDSQAWIDLAAIRDEHHAMLADINQRFKDFSVLDERFHLLIHRASKNRFIADFYDAIAIVFHYHYQW
NKTAARERNERAIHEHLDYIAALESGDQTAIEKACRIHLRSARQTLLQSLPQMATEGA

Specific function: May be a positive transcriptional regulator for yjjM and/or yjjN. Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48995005, Length=271, Percent_Identity=31.3653136531365, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 34550; Mature: 34418

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQNTVFKEAYNRYAVALRTDTALPSEPEIAAQLGVSRSTARAILTRLSEEGIIRWNKR
CCCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEECCH
QKTVLRQPTDRDLFPSEETDSLHDIIERSFMQRILADDAAPGMQINELELAREIGTGTTS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
VREFLIRFSRFGLIEKRPNSHWTLKGFTREFALELADVREMFELHSAAEFGRLARDSQAW
HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IDLAAIRDEHHAMLADINQRFKDFSVLDERFHLLIHRASKNRFIADFYDAIAIVFHYHYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
WNKTAARERNERAIHEHLDYIAALESGDQTAIEKACRIHLRSARQTLLQSLPQMATEGA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARQNTVFKEAYNRYAVALRTDTALPSEPEIAAQLGVSRSTARAILTRLSEEGIIRWNKR
CCCHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEECCH
QKTVLRQPTDRDLFPSEETDSLHDIIERSFMQRILADDAAPGMQINELELAREIGTGTTS
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHH
VREFLIRFSRFGLIEKRPNSHWTLKGFTREFALELADVREMFELHSAAEFGRLARDSQAW
HHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IDLAAIRDEHHAMLADINQRFKDFSVLDERFHLLIHRASKNRFIADFYDAIAIVFHYHYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
WNKTAARERNERAIHEHLDYIAALESGDQTAIEKACRIHLRSARQTLLQSLPQMATEGA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]