| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547716
Identifier: 209547716
GI number: 209547716
Start: 98282
End: 99559
Strand: Direct
Name: 209547716
Synonym: Rleg2_0105
Alternate gene names: NA
Gene position: 98282-99559 (Clockwise)
Preceding gene: 209547715
Following gene: 209547717
Centisome position: 2.17
GC content: 65.73
Gene sequence:
>1278_bases ATGATCGGCAGATGGCGCGGCCCGCGGGCGGCTTTGACAGGTGTTCTGCTGGCGGCGTTCGCGCTTGCCGGCTGCGGCGG CAGGCCGGTCGGCGTCATGCAGGCGGCCGGCAGCGTGCCGCCCGGCACGTCGAAGGTCGATCTTCTTGTCGCGACGACGC GCGCTGCCGACGACAATCCCGCCGTGCTTTTCTCTGGTGAACGCGGCACTGGCCTTACCGTCAACGCCGTCGATGTCTCG ATCCCGCCGGAGGCCAATCGCAAGGTCGGTCAGGTGCAATGGCCAAAGCGGCTGCCGGCCGATCCCTTACGCGATTTCGT CACCGTCTCCGTCGATCCACTCGAAGGCGAGCGGGCGGGGGAGACCTGGCTGAAGGGCCATATGCCGAAAAGCCGCCGGG TGCTGGTCTTCGTGCACGGCTTCAACAATCGCTATGAGGACGCTGTCTACCGCTTCGCCCAGATCGTCCATGATTCGCAT GCCGACGTCGCTCCCGTCGTCTTCACCTGGCCTTCGCGCGCCAGCATCTTCGATTACAATTACGACAAGGAAAGCACCAA CTATTCCCGTGACGCGCTGGAGGAGCTGCTGACCCGCACCGCCGCCAATCCCGCCGTCAGCGACGTCACCATCATGGCCC ATTCGATGGGCACATGGCTGACCGTCGAAGCGCTCCGGCAGATGGCGATCCGCAATGGTCATGTCGCGTCCAAGATCAAC AACGTCATCCTCGCCTCGCCGGATCTCGATGTCGACGTCTTCGGCCGCCAGTTCGCAAGCCTCGGCAAGGACCGACCGCA CTTCACCATCTTCGTCTCCAGGGATGACCGGGCGCTGGCGCTGTCGCGGCGCATTTCCGGCAATGTCGACCGCCTCGGCC AGATCGATCCTTCGGTCGAGCCCTATCGCAGCAAGCTGGAGGCGGCCGGCATCACCGTGCTCGATTTGACCAAGCTCAAG GGCGGCGACCGGCTGAACCACGGCAAATTCGCCGAAAGCCCCGAGGTGGTGAAGCTGATCGGCGACCGGCTGATTGCCGG CCAGACGATCACCGATTCCAATGTCGGCCTCGGCGAGGCCGTCGGCGCGGTGGCGATGGGCGCTGCCCAGACGGCCGGAA GTGCCGTCAGCGTCGCCGTCAGCACGCCGATCGCGATCTTCGATCCGCGCACCCGCCGCAACTACGACGCCCAGCTGAAG CGCCTCGGCCGGTCGGTCGACAATACCGTCGGCTCAGTCGGCGACAGCGTCGGCGCCGGCCTGCCGGAAAGCCAGTAA
Upstream 100 bases:
>100_bases CCAAGCGATTCCATCGCGCGCAAATTTGACTCGGCAAGCACCGTCAGCCTATTTGAACGGGCGCCGCCTGTCCGGTGCGG GAACCGGTTGGAGTTTGATC
Downstream 100 bases:
>100_bases AAATTCCACAAAGCAACTTTCCCAGCGAATTGCGAAAACAAAGAGATAGAGAATTTCCGTGCTTCGGAGAAAACGGAAAT TCTCTAGGCATCACCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIGRWRGPRAALTGVLLAAFALAGCGGRPVGVMQAAGSVPPGTSKVDLLVATTRAADDNPAVLFSGERGTGLTVNAVDVS IPPEANRKVGQVQWPKRLPADPLRDFVTVSVDPLEGERAGETWLKGHMPKSRRVLVFVHGFNNRYEDAVYRFAQIVHDSH ADVAPVVFTWPSRASIFDYNYDKESTNYSRDALEELLTRTAANPAVSDVTIMAHSMGTWLTVEALRQMAIRNGHVASKIN NVILASPDLDVDVFGRQFASLGKDRPHFTIFVSRDDRALALSRRISGNVDRLGQIDPSVEPYRSKLEAAGITVLDLTKLK GGDRLNHGKFAESPEVVKLIGDRLIAGQTITDSNVGLGEAVGAVAMGAAQTAGSAVSVAVSTPIAIFDPRTRRNYDAQLK RLGRSVDNTVGSVGDSVGAGLPESQ
Sequences:
>Translated_425_residues MIGRWRGPRAALTGVLLAAFALAGCGGRPVGVMQAAGSVPPGTSKVDLLVATTRAADDNPAVLFSGERGTGLTVNAVDVS IPPEANRKVGQVQWPKRLPADPLRDFVTVSVDPLEGERAGETWLKGHMPKSRRVLVFVHGFNNRYEDAVYRFAQIVHDSH ADVAPVVFTWPSRASIFDYNYDKESTNYSRDALEELLTRTAANPAVSDVTIMAHSMGTWLTVEALRQMAIRNGHVASKIN NVILASPDLDVDVFGRQFASLGKDRPHFTIFVSRDDRALALSRRISGNVDRLGQIDPSVEPYRSKLEAAGITVLDLTKLK GGDRLNHGKFAESPEVVKLIGDRLIAGQTITDSNVGLGEAVGAVAMGAAQTAGSAVSVAVSTPIAIFDPRTRRNYDAQLK RLGRSVDNTVGSVGDSVGAGLPESQ >Mature_425_residues MIGRWRGPRAALTGVLLAAFALAGCGGRPVGVMQAAGSVPPGTSKVDLLVATTRAADDNPAVLFSGERGTGLTVNAVDVS IPPEANRKVGQVQWPKRLPADPLRDFVTVSVDPLEGERAGETWLKGHMPKSRRVLVFVHGFNNRYEDAVYRFAQIVHDSH ADVAPVVFTWPSRASIFDYNYDKESTNYSRDALEELLTRTAANPAVSDVTIMAHSMGTWLTVEALRQMAIRNGHVASKIN NVILASPDLDVDVFGRQFASLGKDRPHFTIFVSRDDRALALSRRISGNVDRLGQIDPSVEPYRSKLEAAGITVLDLTKLK GGDRLNHGKFAESPEVVKLIGDRLIAGQTITDSNVGLGEAVGAVAMGAAQTAGSAVSVAVSTPIAIFDPRTRRNYDAQLK RLGRSVDNTVGSVGDSVGAGLPESQ
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45483; Mature: 45483
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRWRGPRAALTGVLLAAFALAGCGGRPVGVMQAAGSVPPGTSKVDLLVATTRAADDNP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCC AVLFSGERGTGLTVNAVDVSIPPEANRKVGQVQWPKRLPADPLRDFVTVSVDPLEGERAG EEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCC ETWLKGHMPKSRRVLVFVHGFNNRYEDAVYRFAQIVHDSHADVAPVVFTWPSRASIFDYN CHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECC YDKESTNYSRDALEELLTRTAANPAVSDVTIMAHSMGTWLTVEALRQMAIRNGHVASKIN CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHC NVILASPDLDVDVFGRQFASLGKDRPHFTIFVSRDDRALALSRRISGNVDRLGQIDPSVE CEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHCCCHHHHCCCCCCCC PYRSKLEAAGITVLDLTKLKGGDRLNHGKFAESPEVVKLIGDRLIAGQTITDSNVGLGEA HHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHH VGAVAMGAAQTAGSAVSVAVSTPIAIFDPRTRRNYDAQLKRLGRSVDNTVGSVGDSVGAG HHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCC LPESQ CCCCC >Mature Secondary Structure MIGRWRGPRAALTGVLLAAFALAGCGGRPVGVMQAAGSVPPGTSKVDLLVATTRAADDNP CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCCCC AVLFSGERGTGLTVNAVDVSIPPEANRKVGQVQWPKRLPADPLRDFVTVSVDPLEGERAG EEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCEEEEEECCCCCCCCC ETWLKGHMPKSRRVLVFVHGFNNRYEDAVYRFAQIVHDSHADVAPVVFTWPSRASIFDYN CHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECC YDKESTNYSRDALEELLTRTAANPAVSDVTIMAHSMGTWLTVEALRQMAIRNGHVASKIN CCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHC NVILASPDLDVDVFGRQFASLGKDRPHFTIFVSRDDRALALSRRISGNVDRLGQIDPSVE CEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEHHHHHCCCHHHHCCCCCCCC PYRSKLEAAGITVLDLTKLKGGDRLNHGKFAESPEVVKLIGDRLIAGQTITDSNVGLGEA HHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHH VGAVAMGAAQTAGSAVSVAVSTPIAIFDPRTRRNYDAQLKRLGRSVDNTVGSVGDSVGAG HHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCC LPESQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA