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The map label for this gene is oxaA [H]

Identifier: 209547692

GI number: 209547692

Start: 77463

End: 79256

Strand: Reverse

Name: oxaA [H]

Synonym: Rleg2_0080

Alternate gene names: 209547692

Gene position: 79256-77463 (Counterclockwise)

Preceding gene: 209547693

Following gene: 209547691

Centisome position: 1.75

GC content: 60.93

Gene sequence:

>1794_bases
ATGGAAAAAAACCGCAATTACTTCATTGCGATCGCTCTCTCGGTGCTGATCGTCCTCGGCTGGCAGTTTCTCTATATGAA
TCCGCGCATCGAGGCCCAGCGCAAGGCGCAGGAAGCCCAGAAGGCGCAGCAGAAAACCGAACAGGTGCAGCAGCCCGCAG
CAAACGGCGCGGCGCCGGCGCCGACGAGTGGGACCGCCCCCTCGGGTCAGGCCGTCGCCACGGCGACGCTCGAACAGGCG
CTGGCAAAGAACCCGCGCGTCGTCATCGATACGCCTGCGCTTTCCGGCTCGATCAACCTCGCCGGCGCCCGGCTCGACGA
CCTGAAACTCAAGGGCTATCACGAGACCGTCGACGACTCGAGCCCAACCATCACCCTGTTCAGCCCGGCGGAAACCAAGG
ACGGTTACTTCACCGAGCTCGGCTATATCGGCAGCGACGCCACGGGCAACGTTCCCGGCGCCTCGACGCTCTGGACGGCG
CCCGAGGGCGCCAAGCTCACCGACAAGACGCCGGTGACGCTCTCCTATACCAACGACAAGGGCCTGACCTTTACCCGGAC
GATTTCCGTCGACGAACGCTACATGTTCACCGTCGCCGACAAGGTCGAAAATACCGGCCAGGCTCCGGTATCACTGTCTT
CCTACGGCCGCGTGACGCGTTACAACAAGCCGACGACGCCCTCCGTCTACGTGCTGCATGAAGGCTTCATCGGCGTCATC
GGCGATGACGGCCTTGTCGAAACCAAATATACCGCCGCCGAGAAGGAAGCCGTCATGCCGCCGAAATCCACCGGCGGCTG
GCTTGGCATTACCGACAAATACTGGGCCGCGACGATCATTCCGCCGCAGACGTCGGCCTATGAAGCACGCTTCTCGCATT
TTGCCGATGGTCAGCCGCGCTATCAGGCCGATTACAAGGACGATGCCTTCACCGTTGCGCCGGGCCAATCGATCGAGCTC
AAGAACCTCGTCTTCGCCGGCGCCAAGGAAGTGCCCGTCATCGACGGCTACGAGACCAGCTATTCGATCCCGAAGTTCGA
CCGGCTGATCGACTGGGGTTGGTTCTATTTCATCACCAAGCCGATGTTCAAGCTGATGGACTTCTTCTATCGCTTCTTCG
GCAATTTCGGCGTGGCGATCCTGTGCACCACCATCGTCGTCAAGGCGCTGTTCTTCCCGCTCGCCAGCAAGCAATATGCT
TCGATGGCGAACATGAAGCGCATGCAGCCGAAGATGGAGGAGCTGAAGGCGAAATTCGCCGACGACCGCATGGGGCTGCA
GCAGGCGACGATGCAGCTCTACAAGGAAGAGAAGATCAACCCGATCGCCGGCTGCTGGCCGGTGGCGCTGCAGATCCCGA
TCTTCTTCTCGCTCTACAAGGTGATCTACATCACCATCGAGATGCGGCACGCGCCGTTCTTCGGCTGGATCAAGGACCTT
TCGGCCCCCGATCCGACGACGATCGTCAATCTGTTCGGCCTGCTGCCCTTCGAAGCGCCGACCATCCTGCATCTCGGCGT
CTGGCCGCTGATCATGGGCGTCACCATGTTCCTGCAGATGCGCATGAACCCGACGCCGCCCGATCCGACCCAGGCGATGA
TCTTCACCTGGATGCCGCTGGTGTTCATGTTCATGCTGGCAAGCTTCCCGGCCGGCCTGGTCATCTACTGGGCCTGGAAC
AACACGCTCTCGGTGATCCAGCAGTCGGTGATCATGAAGCGCCAGGGCGTCAAGGTCGAACTCTTCGACAATCTGAAGGG
CCTGTTCCGGCGAAAAACGGCGCCGTCGAAATGA

Upstream 100 bases:

>100_bases
TTGAGGCGTCCTTCAAAGAATTGGCCGCGGAACTGAAATTTCGCGTGGAAACCAGGCCGAAACCCCGGCGCTCCGGAGAC
GGACGCCCCAGGAACGTATG

Downstream 100 bases:

>100_bases
CGCTCTCAAGCCCCGCTCCGGCGGGGCTTTTCATTTCCGGGCGGACCGAGGCGCGAAGCGTAGACCACCTCAAAGCTTGA
CATCCGTCCGCAAAACCACG

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPAPTSGTAPSGQAVATATLEQA
LAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDSSPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTA
PEGAKLTDKTPVTLSYTNDKGLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI
GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPRYQADYKDDAFTVAPGQSIEL
KNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITKPMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYA
SMANMKRMQPKMEELKAKFADDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKDL
SAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMPLVFMFMLASFPAGLVIYWAWN
NTLSVIQQSVIMKRQGVKVELFDNLKGLFRRKTAPSK

Sequences:

>Translated_597_residues
MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPAPTSGTAPSGQAVATATLEQA
LAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDSSPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTA
PEGAKLTDKTPVTLSYTNDKGLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI
GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPRYQADYKDDAFTVAPGQSIEL
KNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITKPMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYA
SMANMKRMQPKMEELKAKFADDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKDL
SAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMPLVFMFMLASFPAGLVIYWAWN
NTLSVIQQSVIMKRQGVKVELFDNLKGLFRRKTAPSK
>Mature_597_residues
MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPAPTSGTAPSGQAVATATLEQA
LAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDSSPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTA
PEGAKLTDKTPVTLSYTNDKGLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI
GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPRYQADYKDDAFTVAPGQSIEL
KNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITKPMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYA
SMANMKRMQPKMEELKAKFADDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKDL
SAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMPLVFMFMLASFPAGLVIYWAWN
NTLSVIQQSVIMKRQGVKVELFDNLKGLFRRKTAPSK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=503, Percent_Identity=30.4174950298211, Blast_Score=248, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 66513; Mature: 66513

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA
CCCCCCEEEHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCEECCEEECCCCCCCCCC
SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCC
GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI
CEEEEEEEECCCCEEEEEHHHHCCCCCCCEEHHCCCCEEECCCCCCCEEEEEECCEEEEE
GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR
CCCCEEECEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK
CCCCCCCCEEEECCCCCEEHHHHEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHH
DDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKDL
HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHC
SAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMPL
CCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRKTAPSK
HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKNRNYFIAIALSVLIVLGWQFLYMNPRIEAQRKAQEAQKAQQKTEQVQQPAANGAAPA
CCCCCCEEEHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTSGTAPSGQAVATATLEQALAKNPRVVIDTPALSGSINLAGARLDDLKLKGYHETVDDS
CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEECCEECCEEECCCCCCCCCC
SPTITLFSPAETKDGYFTELGYIGSDATGNVPGASTLWTAPEGAKLTDKTPVTLSYTNDK
CCEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCC
GLTFTRTISVDERYMFTVADKVENTGQAPVSLSSYGRVTRYNKPTTPSVYVLHEGFIGVI
CEEEEEEEECCCCEEEEEHHHHCCCCCCCEEHHCCCCEEECCCCCCCEEEEEECCEEEEE
GDDGLVETKYTAAEKEAVMPPKSTGGWLGITDKYWAATIIPPQTSAYEARFSHFADGQPR
CCCCEEECEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCCC
YQADYKDDAFTVAPGQSIELKNLVFAGAKEVPVIDGYETSYSIPKFDRLIDWGWFYFITK
CCCCCCCCEEEECCCCCEEHHHHEECCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
PMFKLMDFFYRFFGNFGVAILCTTIVVKALFFPLASKQYASMANMKRMQPKMEELKAKFA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHH
DDRMGLQQATMQLYKEEKINPIAGCWPVALQIPIFFSLYKVIYITIEMRHAPFFGWIKDL
HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHC
SAPDPTTIVNLFGLLPFEAPTILHLGVWPLIMGVTMFLQMRMNPTPPDPTQAMIFTWMPL
CCCCCHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VFMFMLASFPAGLVIYWAWNNTLSVIQQSVIMKRQGVKVELFDNLKGLFRRKTAPSK
HHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA