| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547687
Identifier: 209547687
GI number: 209547687
Start: 74078
End: 75154
Strand: Reverse
Name: 209547687
Synonym: Rleg2_0075
Alternate gene names: NA
Gene position: 75154-74078 (Counterclockwise)
Preceding gene: 209547688
Following gene: 209547683
Centisome position: 1.66
GC content: 60.63
Gene sequence:
>1077_bases ATGACCGATAGCAAAGACCAGCCGCTGTCGCCGGAAGGCGTCGGCAACCTGCCCCACCTGGCCGAAGCCCTTGATGACCA TCGGTTTCGACACTTTCTCGATCACGTCCCCTTTGCCGTGGCTGTCTCCGAGCTCGGCGACAACGAAGCGCTGATCTACG TCAATCTCGAATTCGAACGGCTGACAGCGCTGAGCGCAAAGCAGGTCGAGGGCAAGACCTGGTCCGAGCTCGACTTGAAT TCCACCGCCATTTCGGGAGGCGCGACGCTCACCGCCGCCGTGACCTCTGCCGAGGAGTATATTGGCGCGTTCTCGCTGGT CGCCGAACCCGAGAGCACTGCCATTATCGATGTCTGGTCGAATACCATCGTCAACGATGATGACACCCCGCTGTTCCGAT TGGTGGCCTTTGCGGCGCGCAATGAGGCGGCAGCTGACCAAAGCTTCGGCGAACTGCTGACGGAGAAGGATGTCCTTCTG CGCGAACTTCAGCATCGCGTGAAAAACAATCTCCAGATGATCACGGCGCTGATCCGGATGGAGGCGCGCAATGCGCAACA GAGCGAGGAAAGCGAAAGGTTTGCACGGCTTGCCGGGCGAATTGAGGCCCTGGCGCTGTTGTATCGCTCGCTGTCGGACG AAGAGAAAGGCGCCACGGTCGATCTTGGAACCTATGTGAGCCAGATTGCCGCCTCGGTCATGGCGGCTCATGCCGTGGAA GGGATCCGGCTGGACATGAAGGTCGACACCTGGCCGGTTTCGGTCGATGTGGCCATGCCCGCCGGGTTGGTCATCAACGA ACTGCTGACCAATACGCTCAAACATGCCTTCGTGGGGCGTGATGGCGGAGAAATCACGCTGCGCTGTGTCGTCAGCGATG CCGGGTGCAGGATCACCGTCGCCGATAACGGGGTCGGCCTTCCACAAGATGTGACTTGGCCGCACCCGGGCAAACTCAGC GCGATGATCGTACAGTCGCTGAAACAGAACGCTCGCGCCAAGGTCGAAGTCACCTCGTCCCCCGACGCCGGCGTGAGCGT CTCGCTCGTTTTCCCAATAGCCGAAGCGGCCCGATAG
Upstream 100 bases:
>100_bases GTAAGCGGACCGGCGGTGATTGCACTTGCGTCCCCGGAGTTTTTAAAGCAACCCTCCATCCCAGGCGGTGCAAGAGCAGT CCGCGTGCGCGAGTAATGAG
Downstream 100 bases:
>100_bases CTCATCGCGGGAAAACTGGTCGGAAGTCGCAATAAGTCATCCGTCTGTATCCGGGGCGCCCCGAAGAGCGCCCCAGGCCC TGCCAAGATGGGCGGGCTTA
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: EL346-LOV-histidine kinase; EL346-LOV-HK [H]
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MTDSKDQPLSPEGVGNLPHLAEALDDHRFRHFLDHVPFAVAVSELGDNEALIYVNLEFERLTALSAKQVEGKTWSELDLN STAISGGATLTAAVTSAEEYIGAFSLVAEPESTAIIDVWSNTIVNDDDTPLFRLVAFAARNEAAADQSFGELLTEKDVLL RELQHRVKNNLQMITALIRMEARNAQQSEESERFARLAGRIEALALLYRSLSDEEKGATVDLGTYVSQIAASVMAAHAVE GIRLDMKVDTWPVSVDVAMPAGLVINELLTNTLKHAFVGRDGGEITLRCVVSDAGCRITVADNGVGLPQDVTWPHPGKLS AMIVQSLKQNARAKVEVTSSPDAGVSVSLVFPIAEAAR
Sequences:
>Translated_358_residues MTDSKDQPLSPEGVGNLPHLAEALDDHRFRHFLDHVPFAVAVSELGDNEALIYVNLEFERLTALSAKQVEGKTWSELDLN STAISGGATLTAAVTSAEEYIGAFSLVAEPESTAIIDVWSNTIVNDDDTPLFRLVAFAARNEAAADQSFGELLTEKDVLL RELQHRVKNNLQMITALIRMEARNAQQSEESERFARLAGRIEALALLYRSLSDEEKGATVDLGTYVSQIAASVMAAHAVE GIRLDMKVDTWPVSVDVAMPAGLVINELLTNTLKHAFVGRDGGEITLRCVVSDAGCRITVADNGVGLPQDVTWPHPGKLS AMIVQSLKQNARAKVEVTSSPDAGVSVSLVFPIAEAAR >Mature_357_residues TDSKDQPLSPEGVGNLPHLAEALDDHRFRHFLDHVPFAVAVSELGDNEALIYVNLEFERLTALSAKQVEGKTWSELDLNS TAISGGATLTAAVTSAEEYIGAFSLVAEPESTAIIDVWSNTIVNDDDTPLFRLVAFAARNEAAADQSFGELLTEKDVLLR ELQHRVKNNLQMITALIRMEARNAQQSEESERFARLAGRIEALALLYRSLSDEEKGATVDLGTYVSQIAASVMAAHAVEG IRLDMKVDTWPVSVDVAMPAGLVINELLTNTLKHAFVGRDGGEITLRCVVSDAGCRITVADNGVGLPQDVTWPHPGKLSA MIVQSLKQNARAKVEVTSSPDAGVSVSLVFPIAEAAR
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR011495 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07568 HisKA_2; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 38615; Mature: 38484
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSKDQPLSPEGVGNLPHLAEALDDHRFRHFLDHVPFAVAVSELGDNEALIYVNLEFER CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEHHH LTALSAKQVEGKTWSELDLNSTAISGGATLTAAVTSAEEYIGAFSLVAEPESTAIIDVWS HHHHHHHHCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHEEECCCCCEEEEECC NTIVNDDDTPLFRLVAFAARNEAAADQSFGELLTEKDVLLRELQHRVKNNLQMITALIRM CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNAQQSEESERFARLAGRIEALALLYRSLSDEEKGATVDLGTYVSQIAASVMAAHAVE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHC GIRLDMKVDTWPVSVDVAMPAGLVINELLTNTLKHAFVGRDGGEITLRCVVSDAGCRITV CEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEE ADNGVGLPQDVTWPHPGKLSAMIVQSLKQNARAKVEVTSSPDAGVSVSLVFPIAEAAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCHHHCC >Mature Secondary Structure TDSKDQPLSPEGVGNLPHLAEALDDHRFRHFLDHVPFAVAVSELGDNEALIYVNLEFER CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEHHH LTALSAKQVEGKTWSELDLNSTAISGGATLTAAVTSAEEYIGAFSLVAEPESTAIIDVWS HHHHHHHHCCCCCCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHEEECCCCCEEEEECC NTIVNDDDTPLFRLVAFAARNEAAADQSFGELLTEKDVLLRELQHRVKNNLQMITALIRM CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EARNAQQSEESERFARLAGRIEALALLYRSLSDEEKGATVDLGTYVSQIAASVMAAHAVE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHC GIRLDMKVDTWPVSVDVAMPAGLVINELLTNTLKHAFVGRDGGEITLRCVVSDAGCRITV CEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEE ADNGVGLPQDVTWPHPGKLSAMIVQSLKQNARAKVEVTSSPDAGVSVSLVFPIAEAAR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA