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The map label for this gene is rmuC [H]

Identifier: 209547666

GI number: 209547666

Start: 56023

End: 57246

Strand: Reverse

Name: rmuC [H]

Synonym: Rleg2_0054

Alternate gene names: 209547666

Gene position: 57246-56023 (Counterclockwise)

Preceding gene: 209547672

Following gene: 209547665

Centisome position: 1.26

GC content: 63.07

Gene sequence:

>1224_bases
ATGTCCGTCAATTCCGATTCGTTCACTCTGTCGTTTGCCTCGATCAGCCCGGCCATGCTGGCGCTTGCCGGCGGCATTCT
CCTGGCCCTCATCCTTCTGGTCATCGTGCTTCTGCTGCGGGGCGCAAGTCTTCGCCGCGAGCAGGCCGAGGAAGCGAGTT
TTCGCGCTGGAGAAAGCGAGGCGCGCATGGCCGAGCTTCTGAAGATCCAGGCGGAGATGCAAGGCCGTATCGCGGCGATG
ACCGAAGTCTTCGGCGCGCGGCAGAGCGAGCTCAACCAGGCGATCAGCCAACGCCTCGACGGCATGTCGCAGCGCGTCAA
CTCGACGATCACCGAGCAGACCAAATCGACGCATGAGAATCTGCAGCGGCTGCAGGAGCGGCTGGCGGTGATCGATGCGG
CGCAGAACAATATTCAGACGCTTGCCAAGGATGTCGTCGGGCTGCAGGCCATTCTGTCCAACAAACAGACGCGCGGCGCC
TTCGGCCAGTCGCGAATGGAAACCATCGTTGCCGACGGCCTGCCGATGGGCGCCTATGCCTTTCAGCAGACGCTGTCGAA
CGGCTCCCGGCCGGACTGCACGATCCGCATGCCGAACGGCGCGCCGCCGCTGGTGATCGATGCGAAATTTCCGCTCGAAG
CCTGGAACGCGATCCGCGACGCCGGCAGCCCGGAGGCCGGCAAGATCGCCGGCCAGCAGTTCCGCCGCGACATGGAGGTC
CATATAAGGGACATTTCCGAGAAATACCTGATCCAGGGGGAAACCCAGGATACGGCCTTTCTCTTCGTGCCGTCGGAATC
GATCTTCGCCGAGATCCACGAAAACTTCGAGCCGGTGGTGCAGAAGGCGCACCGCGCGCGCATCGTCATCGTCTCGCCGT
CGCTGCTGATGCTGTCGATCCAGGTGATCCAGGCCGTGCTCAAGGATCAGCGCATGCGGGCGCAGGCGCATCTGATCCAG
GGCGAAGTGGCGATCCTGATGGACGATCTCGGCCGCCTCGATGAGCGGGTGCGCAAGCTGCAGGGCCATTTTGCCATGGC
GCAGAAGGATATCGACATGGTCGTTACCTCGGCCGACAAACTGACCAAGCGCGGCGCCAAGATCGAAGCGCTGGAATTCG
AGGCCGGCGGCGACAGCAAACCGGGCCGCGACGCCGAACCCGCAGCCAAATCGGTGGAAAGCCGCACCGGTCTTCTCAAG
CTCAGGGTGGTTGACGAAGAGTGA

Upstream 100 bases:

>100_bases
AGGCGCCGGCAGGAGCCGCTGCCTGCGAGGATATTGGGGACCGCCGATTCCGTTCACGTTTTGATCTATATATTGCCGTC
TCTTCTGGTATGGTTGCGGC

Downstream 100 bases:

>100_bases
CCGCTTCGGGCAGTGTCTCGCCCGCATGCGCCAAAGGACGGGACACCCCTGATGATCACAGTTTTCGGGTCCATCAACAT
GGATCTCATCGCCACCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSVNSDSFTLSFASISPAMLALAGGILLALILLVIVLLLRGASLRREQAEEASFRAGESEARMAELLKIQAEMQGRIAAM
TEVFGARQSELNQAISQRLDGMSQRVNSTITEQTKSTHENLQRLQERLAVIDAAQNNIQTLAKDVVGLQAILSNKQTRGA
FGQSRMETIVADGLPMGAYAFQQTLSNGSRPDCTIRMPNGAPPLVIDAKFPLEAWNAIRDAGSPEAGKIAGQQFRRDMEV
HIRDISEKYLIQGETQDTAFLFVPSESIFAEIHENFEPVVQKAHRARIVIVSPSLLMLSIQVIQAVLKDQRMRAQAHLIQ
GEVAILMDDLGRLDERVRKLQGHFAMAQKDIDMVVTSADKLTKRGAKIEALEFEAGGDSKPGRDAEPAAKSVESRTGLLK
LRVVDEE

Sequences:

>Translated_407_residues
MSVNSDSFTLSFASISPAMLALAGGILLALILLVIVLLLRGASLRREQAEEASFRAGESEARMAELLKIQAEMQGRIAAM
TEVFGARQSELNQAISQRLDGMSQRVNSTITEQTKSTHENLQRLQERLAVIDAAQNNIQTLAKDVVGLQAILSNKQTRGA
FGQSRMETIVADGLPMGAYAFQQTLSNGSRPDCTIRMPNGAPPLVIDAKFPLEAWNAIRDAGSPEAGKIAGQQFRRDMEV
HIRDISEKYLIQGETQDTAFLFVPSESIFAEIHENFEPVVQKAHRARIVIVSPSLLMLSIQVIQAVLKDQRMRAQAHLIQ
GEVAILMDDLGRLDERVRKLQGHFAMAQKDIDMVVTSADKLTKRGAKIEALEFEAGGDSKPGRDAEPAAKSVESRTGLLK
LRVVDEE
>Mature_406_residues
SVNSDSFTLSFASISPAMLALAGGILLALILLVIVLLLRGASLRREQAEEASFRAGESEARMAELLKIQAEMQGRIAAMT
EVFGARQSELNQAISQRLDGMSQRVNSTITEQTKSTHENLQRLQERLAVIDAAQNNIQTLAKDVVGLQAILSNKQTRGAF
GQSRMETIVADGLPMGAYAFQQTLSNGSRPDCTIRMPNGAPPLVIDAKFPLEAWNAIRDAGSPEAGKIAGQQFRRDMEVH
IRDISEKYLIQGETQDTAFLFVPSESIFAEIHENFEPVVQKAHRARIVIVSPSLLMLSIQVIQAVLKDQRMRAQAHLIQG
EVAILMDDLGRLDERVRKLQGHFAMAQKDIDMVVTSADKLTKRGAKIEALEFEAGGDSKPGRDAEPAAKSVESRTGLLKL
RVVDEE

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=291, Percent_Identity=25.4295532646048, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 44625; Mature: 44494

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNSDSFTLSFASISPAMLALAGGILLALILLVIVLLLRGASLRREQAEEASFRAGESE
CCCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
ARMAELLKIQAEMQGRIAAMTEVFGARQSELNQAISQRLDGMSQRVNSTITEQTKSTHEN
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRLQERLAVIDAAQNNIQTLAKDVVGLQAILSNKQTRGAFGQSRMETIVADGLPMGAYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHH
FQQTLSNGSRPDCTIRMPNGAPPLVIDAKFPLEAWNAIRDAGSPEAGKIAGQQFRRDMEV
HHHHHCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HIRDISEKYLIQGETQDTAFLFVPSESIFAEIHENFEPVVQKAHRARIVIVSPSLLMLSI
HHHHCCHHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
QVIQAVLKDQRMRAQAHLIQGEVAILMDDLGRLDERVRKLQGHFAMAQKDIDMVVTSADK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LTKRGAKIEALEFEAGGDSKPGRDAEPAAKSVESRTGLLKLRVVDEE
HHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure 
SVNSDSFTLSFASISPAMLALAGGILLALILLVIVLLLRGASLRREQAEEASFRAGESE
CCCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
ARMAELLKIQAEMQGRIAAMTEVFGARQSELNQAISQRLDGMSQRVNSTITEQTKSTHEN
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQRLQERLAVIDAAQNNIQTLAKDVVGLQAILSNKQTRGAFGQSRMETIVADGLPMGAYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHH
FQQTLSNGSRPDCTIRMPNGAPPLVIDAKFPLEAWNAIRDAGSPEAGKIAGQQFRRDMEV
HHHHHCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
HIRDISEKYLIQGETQDTAFLFVPSESIFAEIHENFEPVVQKAHRARIVIVSPSLLMLSI
HHHHCCHHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHH
QVIQAVLKDQRMRAQAHLIQGEVAILMDDLGRLDERVRKLQGHFAMAQKDIDMVVTSADK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LTKRGAKIEALEFEAGGDSKPGRDAEPAAKSVESRTGLLKLRVVDEE
HHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]