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The map label for this gene is yagP [H]

Identifier: 209400952

GI number: 209400952

Start: 327536

End: 328435

Strand: Reverse

Name: yagP [H]

Synonym: ECH74115_0322

Alternate gene names: 209400952

Gene position: 328435-327536 (Counterclockwise)

Preceding gene: 209399565

Following gene: 209395999

Centisome position: 5.89

GC content: 50.0

Gene sequence:

>900_bases
ATGAAAATCGATCTTAATCTTTTACCCATTTTTATCGCGGTAGCAGAAGAGAGTAATTTTAGTAAAGCCGCCGCACGGCT
GGGCGTTACCCGTTCAGCGGTCAGTCAGGGAATAAGACGCCTTGAAGATGCATTCGGGACAATGCTTGTAATGCGGACCA
CGCGCTCAGTTAATTTGACAGAAGCGGGAGAACGGCTGCATAAATCGCTGTCATTACCTTTATCCGGTATTGAGGCAGCG
TTCGAAGAGATGGTTTCTGACCATGTGCCACGCGGACTTCTCAGAATCGCGGTGACGTCAATAGCTGAAGAATTTCTTTC
AGGTCCGCTAATCGCTTCGTTTGCAGCAGCCAATCCAGCCGTTACGCTTGATATTGTTGTCACGGATGAGGAATTCGATA
TCGTGGCCGCAGGTTACGATGCTGGCGTAAGGCTCGGAGAGGTCATTGAAAAAGACATGATTGCTGTGCCCCTTACCGGC
AGGCAGCGTGAAATGGTCGTTGCCTCTCCCTCCTATCTCGCAGCCAACAGCACACCTGTTCATCCGCGTGAACTTGTGAA
TCATAAGTGTATCGGCTGGCGTCAGTCCCCGGAGGTTGCGCCTTATCGCTGGCCATTTGAAGAAAACGGGAGAGCTTTCG
ACCTTGCGATTGAACCGCAGATTACGACTAATGATCTGCGTCTGATGTTGAGGCTGGCTCTTGCCGGCGGAGGAATAACA
ATTGCCACTCAGGAAACTTTCAGGCCGTATATTGAAAGCGGTAAGCTTGTATCTCTGCTTGATGACTTTCTTCCACAATT
TCCGGGCTTCTATCTGTATTTCCCACAGCGTCGCAATATTGCACCAAAGCTCCGCGCTCTGATTGACCACGTTAAGGAAT
GGCGGCAGCAATTGGCTTAA

Upstream 100 bases:

>100_bases
ATTACGTTCTCCTTCAAATGTGTTCGGAGAGAGAATAGAACTTTATGATTGGTTCCAGTATCCTGCTTTCAATGTACTCA
GTGGTTAGCGGCATTAAACA

Downstream 100 bases:

>100_bases
ATGTCTGCACCTGCATTGCCTGATGTCAGAACAGTATTTTGATTAATTGCCAGGGTTACAATGGCACAAATGCGGCACAG
GAGGAAACGTGGTGTATTTA

Product: transcriptional regulator, LysR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKIDLNLLPIFIAVAEESNFSKAAARLGVTRSAVSQGIRRLEDAFGTMLVMRTTRSVNLTEAGERLHKSLSLPLSGIEAA
FEEMVSDHVPRGLLRIAVTSIAEEFLSGPLIASFAAANPAVTLDIVVTDEEFDIVAAGYDAGVRLGEVIEKDMIAVPLTG
RQREMVVASPSYLAANSTPVHPRELVNHKCIGWRQSPEVAPYRWPFEENGRAFDLAIEPQITTNDLRLMLRLALAGGGIT
IATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDHVKEWRQQLA

Sequences:

>Translated_299_residues
MKIDLNLLPIFIAVAEESNFSKAAARLGVTRSAVSQGIRRLEDAFGTMLVMRTTRSVNLTEAGERLHKSLSLPLSGIEAA
FEEMVSDHVPRGLLRIAVTSIAEEFLSGPLIASFAAANPAVTLDIVVTDEEFDIVAAGYDAGVRLGEVIEKDMIAVPLTG
RQREMVVASPSYLAANSTPVHPRELVNHKCIGWRQSPEVAPYRWPFEENGRAFDLAIEPQITTNDLRLMLRLALAGGGIT
IATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDHVKEWRQQLA
>Mature_299_residues
MKIDLNLLPIFIAVAEESNFSKAAARLGVTRSAVSQGIRRLEDAFGTMLVMRTTRSVNLTEAGERLHKSLSLPLSGIEAA
FEEMVSDHVPRGLLRIAVTSIAEEFLSGPLIASFAAANPAVTLDIVVTDEEFDIVAAGYDAGVRLGEVIEKDMIAVPLTG
RQREMVVASPSYLAANSTPVHPRELVNHKCIGWRQSPEVAPYRWPFEENGRAFDLAIEPQITTNDLRLMLRLALAGGGIT
IATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDHVKEWRQQLA

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafC and ygiP [H]

Homologues:

Organism=Escherichia coli, GI1787128, Length=293, Percent_Identity=34.1296928327645, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI1787589, Length=283, Percent_Identity=33.5689045936396, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1786401, Length=297, Percent_Identity=32.3232323232323, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1789440, Length=291, Percent_Identity=25.4295532646048, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI145693193, Length=283, Percent_Identity=29.3286219081272, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI87081978, Length=293, Percent_Identity=27.3037542662116, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1789639, Length=297, Percent_Identity=25.9259259259259, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI157672245, Length=210, Percent_Identity=32.3809523809524, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789173, Length=268, Percent_Identity=26.1194029850746, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786448, Length=303, Percent_Identity=26.0726072607261, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788748, Length=66, Percent_Identity=45.4545454545455, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI145693105, Length=200, Percent_Identity=27, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786713, Length=268, Percent_Identity=28.7313432835821, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787879, Length=103, Percent_Identity=41.747572815534, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005119 [H]

Pfam domain/function: PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33084; Mature: 33084

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLNLLPIFIAVAEESNFSKAAARLGVTRSAVSQGIRRLEDAFGTMLVMRTTRSVNLT
CEEECEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
EAGERLHKSLSLPLSGIEAAFEEMVSDHVPRGLLRIAVTSIAEEFLSGPLIASFAAANPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
VTLDIVVTDEEFDIVAAGYDAGVRLGEVIEKDMIAVPLTGRQREMVVASPSYLAANSTPV
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEECCCCCCCEEEEECCCEEECCCCCC
HPRELVNHKCIGWRQSPEVAPYRWPFEENGRAFDLAIEPQITTNDLRLMLRLALAGGGIT
CHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE
IATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDHVKEWRQQLA
EEEHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIDLNLLPIFIAVAEESNFSKAAARLGVTRSAVSQGIRRLEDAFGTMLVMRTTRSVNLT
CEEECEEEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHH
EAGERLHKSLSLPLSGIEAAFEEMVSDHVPRGLLRIAVTSIAEEFLSGPLIASFAAANPA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
VTLDIVVTDEEFDIVAAGYDAGVRLGEVIEKDMIAVPLTGRQREMVVASPSYLAANSTPV
EEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCEEECCCCCCCEEEEECCCEEECCCCCC
HPRELVNHKCIGWRQSPEVAPYRWPFEENGRAFDLAIEPQITTNDLRLMLRLALAGGGIT
CHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEE
IATQETFRPYIESGKLVSLLDDFLPQFPGFYLYFPQRRNIAPKLRALIDHVKEWRQQLA
EEEHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]