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The map label for this gene is erfK [H]

Identifier: 209400843

GI number: 209400843

Start: 2639486

End: 2640421

Strand: Reverse

Name: erfK [H]

Synonym: ECH74115_2835

Alternate gene names: 209400843

Gene position: 2640421-2639486 (Counterclockwise)

Preceding gene: 209400225

Following gene: 209398593

Centisome position: 47.39

GC content: 49.79

Gene sequence:

>936_bases
ATGATGCGTCGTGTAAATATTCTTTGCTCATTTGCTCTGCTTTTTGCCAGCCATACTAGCCTGGCGGTAACTTATCCATT
ACCTCCAGAGGGTAGCCGTTTAGTGGGGCAGTCGCTTACTGTAACTGTTCCTGATCACAATACCCAGCCGCTGGAGACTT
TTGCCGCACAATACGGGCAAGGGTTAAGTAACATGCTGGAAGCGAATCCGGGCGCTGATGTCTTCTTACCGAAGTCAGGT
TCGCAACTCACCATTCCGCAGCAACTGATTTTGCCCGTCACTGTTCGTAAAGGGATTGTGGTTAACGTCGCTGAGATGCG
TCTTTATTACTACCCACCAGACAGTAATACTGTGGAAGTCTTTCCTATTGGTATCGGCCAGGCTGGGCGAGAAACCCCGC
GTAACTGGGTGACTACCGTTGAACGTAAACAAGAAGCACCAACCTGGACGCCAACGCCGAACACCCGGCGCGAATATGCG
AAACGAGGGGAGAGTTTGCCCGCATTTGTTCCTGCGGGGCCCGATAATCCCATGGGGCTGTACGCGATTTATATTGGCAG
GCTATATGCCATCCACGGTACCAATGCCAATTTTGGTATTGGGCTCCGGGTAAGTCAGGGCTGTATTCGTCTGCGCAATG
ACGATATCAAATATCTGTTTGATAATGTTCCTGTAGGTACTCGTGTGCAAATTATTGATCAGCCAGTGAAATACACAACG
GAACCGGATGGTTCAAAGTGGCTGGAAGTTCATGAGCCGCTGTCGCGCAATCGTGCTGAATATGAGTCTGACCGAAAAGT
GCCATTGCCGGTAACCCCATCTTTGCGGGCGTTTATCAACGGGCAAGAAGTTGATGTGAATCGCGCAAATGCTGCGTTGC
AACGTCGATCGGGAATGCCTGTGCAAATTAGTTCTGGTTCAAGACAGATGTTTTAA

Upstream 100 bases:

>100_bases
GTTCTACCGGGGAATACGACTTCTGATTTGAACAGTTAAAAACGAAAAGTCTGATAAAAGCTATACTTAACCGATAGCTT
TCGCGACTTAGGAAAGGGAC

Downstream 100 bases:

>100_bases
GAGCGTTGGTAATTAGAAAGCAAAAAGCCTGCTAGAAAGCAGGCTTTTTTGAATTTGGCTCCTCTGACTGGACTCGAACC
AGTGACATACGGATTAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSG
SQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF

Sequences:

>Translated_311_residues
MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSG
SQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
>Mature_311_residues
MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSG
SQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=310, Percent_Identity=99.0322580645161, Blast_Score=630, Evalue=0.0,
Organism=Escherichia coli, GI1787040, Length=304, Percent_Identity=62.5, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.1228070175439, Blast_Score=270, Evalue=6e-74,
Organism=Escherichia coli, GI1787968, Length=311, Percent_Identity=45.016077170418, Blast_Score=244, Evalue=7e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34507; Mature: 34507

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCC
GLSNMLEANPGADVFLPKSGSQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEV
CHHHHHHCCCCCCEEEECCCCEEECCHHHEEEEEECCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCC
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMP
CCCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCC
VQISSGSRQMF
EEECCCCCCCC
>Mature Secondary Structure
MMRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQ
CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCC
GLSNMLEANPGADVFLPKSGSQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEV
CHHHHHHCCCCCCEEEECCCCEEECCHHHEEEEEECCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCC
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMP
CCCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCC
VQISSGSRQMF
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]