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The map label for this gene is ydeR [H]

Identifier: 209400755

GI number: 209400755

Start: 2023640

End: 2023930

Strand: Reverse

Name: ydeR [H]

Synonym: ECH74115_2116

Alternate gene names: 209400755

Gene position: 2023930-2023640 (Counterclockwise)

Preceding gene: 209397662

Following gene: 209396169

Centisome position: 36.32

GC content: 43.99

Gene sequence:

>291_bases
TTGTCATTAACCGATTGTCCGGCTGAAACAAGTGCAGTGACGGCAATCGTGACAGGTTCAACTGACAATACGGGTTATTA
CAAAAATGAAGGTACTGCCGAAAATATTCAGATAGAGCTTAGGGATGACCAGGATGCGACGTTAAAAAATGGCGATAGCA
AAACGGTTATTGTTGATGAGATCACTCGTAATGCACAGTTTCCACTTAAGGCAAGAGCTATCACGGTGAATGGAAACGCA
AGCCAGGGAACGATCGAGGCGCTAATCAATGTGATCTACACCTGGCAATAA

Upstream 100 bases:

>100_bases
CTGCACTATTCAAACCAAAGAAGCTAACGTTAATCTCGGGGATCTTTATACGCGCAATCTGCAACAACCTGGTTCTGCAT
CTGGCTGGCACAATATTACT

Downstream 100 bases:

>100_bases
CGTCGATTCGATTTTCTTAGCCTTCTTTTTAAATCAATTTTTTAACCTTAGGATATATCATGGGTAAAACAATCAGTATA
AAGGTCCTGTTCGGTATTTA

Product: protein fimG homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSLTDCPAETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSKTVIVDEITRNAQFPLKARAITVNGNA
SQGTIEALINVIYTWQ

Sequences:

>Translated_96_residues
MSLTDCPAETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSKTVIVDEITRNAQFPLKARAITVNGNA
SQGTIEALINVIYTWQ
>Mature_95_residues
SLTDCPAETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSKTVIVDEITRNAQFPLKARAITVNGNAS
QGTIEALINVIYTWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787780, Length=96, Percent_Identity=96.875, Blast_Score=191, Evalue=9e-51,
Organism=Escherichia coli, GI1790774, Length=95, Percent_Identity=56.8421052631579, Blast_Score=118, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 10367; Mature: 10235

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTDCPAETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSKTVIVDE
CCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCEEEEEEECCCCCEECCCCCCEEEEEE
ITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ
CCCCCCCCEEEEEEEECCCCCCCHHHHHEEEEEECC
>Mature Secondary Structure 
SLTDCPAETSAVTAIVTGSTDNTGYYKNEGTAENIQIELRDDQDATLKNGDSKTVIVDE
CCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCEEEEEEECCCCCEECCCCCCEEEEEE
ITRNAQFPLKARAITVNGNASQGTIEALINVIYTWQ
CCCCCCCCEEEEEEEECCCCCCCHHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]