| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hisB
Identifier: 209400725
GI number: 209400725
Start: 2730368
End: 2731435
Strand: Direct
Name: hisB
Synonym: ECH74115_2955
Alternate gene names: 209400725
Gene position: 2730368-2731435 (Clockwise)
Preceding gene: 209396323
Following gene: 209396111
Centisome position: 49.0
GC content: 53.28
Gene sequence:
>1068_bases ATGAGTCAGAAGTATCTTTTTATCGATCGCGATGGAACCCTGATTAGCGAACCGCCGAGTGATTTTCAGGTGGATCGTTT TGACAAACTCGCCTTTGAACCGGGCGTGATCCCGCAACTGCTGAAGCTGCAAAAAGCGGGCTACAAACTGGTGATGATCA CTAATCAGGATGGTCTGGGAACACAAAGTTTCCCGCAGGCGGATTTCGATGGCCCGCACAACCTGATGATGCAGATATTC ACCTCGCAAGGCGTACAGTTTGATGAAGTGCTGATTTGTCCGCACCTGCCCGCCGATGAGTGCGACTGCCGTAAACCGAA AGTAAAACTGGTGGAGCGTTATCTCGCTGAGCAAGCGATGGATCGCGCCAACAGTTATGTGATTGGCGATCGCGCGACCG ATATTCAACTCGCTGAAAACATGGGCATTAATGGTTTACGCTACGACCGCGAAACCCTGAACTGGCCAATGATTGGCGAG CAACTCACCAGACGTGACCGTTACGCTCACGTAGTGCGTAATACCAAAGAGACGCAGATTGACGTTCAGGTGTGGCTGGA TCGTGAAGGTGGCAGCAAGATTAATACCGGCGTTGGCTTCTTTGATCACATGCTGGATCAGATCGCCACCCACGGCGGTT TCCGTATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGC GAAGCGTTAAAAATTGCCCTCGGCGATAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTGCCGATGGACGAATGCCTTGC CCGCTGCGCGCTGGATATCTCTGGTCGCCCGCACCTGGAATATAAAGCCGAGTTTACCTACCAACGCGTGGGCGATCTCA GCACCGAGATGATCGAGCACTTCTTCCGTTCGCTCTCTTACACCATGGGCGTGACGCTCCACCTGAAAACCAAAGGTAAA AACGATCATCACCGTGTAGAGAGCCTGTTCAAAGCCTTTGGTCGGACCCTGCGCCAGGCCATCCGCGTGGAAGGCGATAC CCTGCCCTCGTCGAAAGGAGTGCTGTAA
Upstream 100 bases:
>100_bases AGAATAAACAACCCTCTTTAAGCGGCTGCCTGCGAATTACCGTCGGAACCCGTGAAGAAAGCCAGCGCGTCATTGACGCC TTACGTGCGGAGCAAGTTTG
Downstream 100 bases:
>100_bases TGAACGTGGTGATCCTTGATACTGGCTGCGCCAACCTGAACTCGGTGAAGTCTGCCATTGCGCGTCACGGTTATGAACCC AAAGTCAGCCGTGACCCGGA
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE QLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Sequences:
>Translated_355_residues MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE QLTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGK NDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL >Mature_354_residues SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFT SQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQ LTRRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALGE ALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKN DHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=355, Percent_Identity=99.4366197183099, Blast_Score=735, Evalue=0.0, Organism=Escherichia coli, GI1786399, Length=154, Percent_Identity=32.4675324675325, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6324776, Length=165, Percent_Identity=47.8787878787879, Blast_Score=159, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_ECO57 (Q9S5G5)
Other databases:
- EMBL: AB008676 - EMBL: AE005174 - EMBL: BA000007 - PIR: E85827 - PIR: G90981 - RefSeq: NP_288527.2 - RefSeq: NP_310850.2 - PDB: 2FPR - PDB: 2FPS - PDB: 2FPU - PDB: 2FPW - PDB: 2FPX - PDBsum: 2FPR - PDBsum: 2FPS - PDBsum: 2FPU - PDBsum: 2FPW - PDBsum: 2FPX - ProteinModelPortal: Q9S5G5 - SMR: Q9S5G5 - EnsemblBacteria: EBESCT00000027077 - EnsemblBacteria: EBESCT00000055491 - GeneID: 914091 - GeneID: 962080 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z3184 - KEGG: ecs:ECs2823 - GeneTree: EBGT00050000010149 - HOGENOM: HBG289010 - OMA: QDGLGTP - ProtClustDB: PRK05446 - BioCyc: ECOL83334:ECS2823-MONOMER - GO: GO:0005737 - HAMAP: MF_01022 - InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01662 - TIGRFAMs: TIGR01261 - TIGRFAMs: TIGR01656
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P; SSF54211 Ribosomal_S5_D2-typ_fold; SSF56784 SSF56784
EC number: =3.1.3.15; =4.2.1.19
Molecular weight: Translated: 40291; Mature: 40159
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLG CCCCEEEEECCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCC TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEEHHCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLG CCCEEEEECCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCEEEEEEECCCCCC TQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAM CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH DRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLTRRDRYAHVVRNTKETQI HHCCCEEECCCCCCEEEHHCCCCCCEEECHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEE DVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEINVKGDLYIDDHHTVEDTGLALG EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCEEEECCCCCCHHHHHHHH EALKIALGDKRGICRFGFVLPMDECLARCALDISGRPHLEYKAEFTYQRVGDLSTEMIEH HHEEEEECCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCHHHHHHHH FFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFGRTLRQAIRVEGDTLPSSKGVL HHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10222209; 11206551; 11258796