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The map label for this gene is rimP [H]

Identifier: 209400717

GI number: 209400717

Start: 4161819

End: 4162283

Strand: Reverse

Name: rimP [H]

Synonym: ECH74115_4491

Alternate gene names: 209400717

Gene position: 4162283-4161819 (Counterclockwise)

Preceding gene: 209395923

Following gene: 209398727

Centisome position: 74.7

GC content: 49.03

Gene sequence:

>465_bases
TTGGGGGTGGGCTTGTCCACATTAGAGCAAAAATTAACAGAGATGATTACTGCGCCAGTTGAGGCCCTGGGTTTTGAACT
GGTTGGCATCGAATTTATTCGCGGTCGCACATCCACACTGCGCATCTATATTGATAGTGAAGATGGCATCAATGTTGATG
ATTGTGCTGATGTGAGCCACCAGGTAAGTGCTGTGCTGGATGTTGAAGATCCCATCACCGTTGCTTATAACCTGGAAGTC
TCCTCACCGGGTCTCGATCGCCCACTGTTCACGGCTGAACACTACGCCCGTTTTGTCGGAGAAGAGGTGACTCTGGTTCT
CCGTATGGCGGTACAAAACCGTCGTAAATGGCAGGGCGTTATCAAAGCGGTAGACGGTGAAATGATCACAGTTACCGTCG
AAGGTAAAGATGAAGTGTTCGCGCTGAGTAATATCCAGAAGGCGAACTTGGTTCCCCACTTTTAA

Upstream 100 bases:

>100_bases
AGTTGCGGTTATAGGGTTCAGTTATATAAAGCCCCGATTTATCGGGGTTTTTTGTTATCTGACTACAGAATAACTGGGCT
TTAGGCCCTTTTTTTATGTC

Downstream 100 bases:

>100_bases
TAGTCTGGATGAGGTGAAAAGCCCGCGATGAACAAAGAAATTTTGGCTGTAGTTGAAGCCGTATCCAATGAAAAGGCGCT
ACCTCGCGAGAAGATTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGVGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEV
SSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF

Sequences:

>Translated_154_residues
MGVGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEV
SSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>Mature_153_residues
GVGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPITVAYNLEVS
SPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=99.3333333333333, Blast_Score=306, Evalue=4e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16978; Mature: 16846

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSH
CCCCHHHHHHHHHHHHHCCHHHHCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHCHHH
QVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGV
HHEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH
IKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
HHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
GVGLSTLEQKLTEMITAPVEALGFELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSH
CCCHHHHHHHHHHHHHCCHHHHCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHCHHH
QVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLVLRMAVQNRRKWQGV
HHEEEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH
IKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
HHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA