| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yoeA [H]
Identifier: 209400707
GI number: 209400707
Start: 2648293
End: 2650440
Strand: Direct
Name: yoeA [H]
Synonym: ECH74115_2845
Alternate gene names: 209400707
Gene position: 2648293-2650440 (Clockwise)
Preceding gene: 209396341
Following gene: 209400114
Centisome position: 47.53
GC content: 45.3
Gene sequence:
>2148_bases ATGTTATATAATATACCTTGTCGAATTTATATCCTTTCCACTCTGTCATTATGCATTTCTGGGATAGTTTCTACTGCAAC CGCAACTTCTTCAGAAACAAAAATCAGCAACGAAGAGACGCTCGTCGTGACCACGAATCGTTCGGCAAGCAACCTTTGGG AAAGCCCGGCGACTATACAGGTTATTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAG GACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAACAAATCCGCATTCGTGGCGAAGCATCCTCCCG TGTTTTAATTCTCATTGATGGTCAGGAGGTAACTTATCAGCGCGCCGGAGATAATTATGGTGTGGGACTGTTGATAGATG AGTCTGCGCTGGAGCGTGTTGAGGTAGTGAAAGGTCCATATTCCGTACTGTACGGTTCACAGGCAATTGGCGGTATTGTT AACTTCATCACCAAAAAGGGAGGTGACAAACTTGCATCTGGAGTTGTGAAAGCTGTTTATAATTCCGCAACAGCAGGCTG GGAAGAATCAATCGCGGTCCAGGGGAGCATCGGTGGATTTGATTATCGCATCAACGGTAGTTATTCTGATCAGGGCAATC GTGATACGCCGGATGGACGTCTGCCGAATACCAACTATCGTAACAATAGTCAGGGTGTATGGTTGGGTTATAACTCCGGA AACCATCGTTTTGGCCTCTCGCTTGATCGCTACAGACTCGCGACACAAACTTACTATGAGGATCCAGACGGAAGTTATGA GGCATTTAGTGTCAAAATACCTAAACTTGAACGAGAGAAAGTTGGGGTATTCTATGACACAGACGTGGACGGTGACTATC TAAAAAAAATTCATTTCGACGCGTATGAGCAGACCATCCAGCGCCAATTTGCCAACGAAGTAAAAACGACACAGCCTGTT CCCAGTCCGATGATTCAGGCTCTGACCGTTCATAACAAGACTGACACCCATGATAAGCAATACACTCAGGCGGTCACATT GCAGAGTCACTTTTCGCTGCCTGCTAATAATGAACTTGTTACCGGTGCACAGTACAAACAAGACAGGGTCAGCCAAAGGT CCGGTGGCATGACCTCAAGCAAATCTCTGACCGGCTTCATTAATAAGGAAACACGAACTCGCTCCTATTATGAGTCAGAG CAAAGTACAGTCTCACTATTCGCACAAAATGACTGGCAATTCGCCGATCACTGGACATGGACAATGGGAGTTCGCCAATA CTGGCTTTCTTCAAAGTTGACGCGTGGTGACGGAGTATCATATACCGCAGGCATTATAAGCGATACCTCTCTTGCCAGAG AGTCTGCGAGTGATCACGAAATGGTAACATCTACAAGCCTGCGCTATTCAGGTTTCGATAACCTGGAGTTACGCGCTGCG TTCGCGCAAGGCTACGTATTTCCCACACTCTCCCAGCTTTTTATGCAGACATCTGCGGGCGGCAGTGTCACATACGGAAA TCCTGATCTTAAGGCTGAACACTCCAATAACTTTGAATTAGGTGCACGATATAATGGTAATCAGTGGCTGATTGACAGCG CAGTTTACTACTCAGAAGCTAAAGATTATATTGCAAGTCTGATCTGTGATGGCAGTATAGTTTGCAATGGTAACACCAAC TCCTCCCGTAGTAGCTACTATTATTATGACAATATTGATCGGGCAAAAACATGGGGACTGGAAATAAGCGCGGAATATAA TGGCTGGGTTTTCTCGCCATATATCAGTGGCAATTTAATTCGTCGGCAATATGAAACTTCAACATTAAAAACAACTAATA CAGGTGAACCAGCGATAAACGGACGTATAGGGCTGAAACATACTCTTGTGATGGGTCAGGCCAACATAATCTCTGATGTT TTTATTCGTGCTGCCTCTAGTGCAAAAGATGACAGTAACGGTACCGAAACAAATGTTCCGGGCTGGGCCACTCTCAACTT TGCAGTAAATACAGAATTCGGTAACGAGGATCAGTACCGGATTAACCTGGCACTCAATAACCTGACAGACAAACGCTACC GTACAGCACATGAAACTATTCCTGCAGCAGGTTTTAATGCAGCTATAGGTTTTGTATGGAATTTCTGA
Upstream 100 bases:
>100_bases CAATTTATGAAGATGACAATAATTATAGATATATGAGAACATAAATGAAAATAATTATCATTACAGCAATCATTTGTACT TTGTATTAATGAGGGATGAA
Downstream 100 bases:
>100_bases TGACAAAAACAATCGTTATGGAATTCTTTGTCCTGATCTGCCCGCTTTGCGGGCAGGCTAACGAACGTATTGTGTTTGTT GAAGGTTTTTCGACGTTGTT
Product: putative TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 715; Mature: 715
Protein sequence:
>715_residues MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQ DIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIV NFITKKGGDKLASGVVKAVYNSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFDAYEQTIQRQFANEVKTTQPV PSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELVTGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESE QSTVSLFAQNDWQFADHWTWTMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEAKDYIASLICDGSIVCNGNTN SSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLIRRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDV FIRAASSAKDDSNGTETNVPGWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF
Sequences:
>Translated_715_residues MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQ DIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIV NFITKKGGDKLASGVVKAVYNSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFDAYEQTIQRQFANEVKTTQPV PSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELVTGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESE QSTVSLFAQNDWQFADHWTWTMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEAKDYIASLICDGSIVCNGNTN SSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLIRRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDV FIRAASSAKDDSNGTETNVPGWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF >Mature_715_residues MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQVIDQQTLQNSTNASIADNLQ DIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQRAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIV NFITKKGGDKLASGVVKAVYNSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFDAYEQTIQRQFANEVKTTQPV PSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELVTGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESE QSTVSLFAQNDWQFADHWTWTMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEAKDYIASLICDGSIVCNGNTN SSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLIRRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDV FIRAASSAKDDSNGTETNVPGWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF
Specific function: Unknown
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788478, Length=608, Percent_Identity=26.1513157894737, Blast_Score=130, Evalue=4e-31, Organism=Escherichia coli, GI1786798, Length=170, Percent_Identity=33.5294117647059, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1790405, Length=156, Percent_Identity=38.4615384615385, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787723, Length=572, Percent_Identity=21.3286713286713, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 [H]
Pfam domain/function: PF07715 Plug [H]
EC number: NA
Molecular weight: Translated: 79150; Mature: 79150
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQ CEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEE VIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQ EEEHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEEECCCEEEEE RAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKGGDKLASGVVKAVY ECCCCCCEEEEECHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH NSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG HCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFD CCEECCEEHHEEEEHHHEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHH AYEQTIQRQFANEVKTTQPVPSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELV HHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCHHHHHEEEEHHHCCCCCCCCEE TGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESEQSTVSLFAQNDWQFADHWTW ECCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCEECCCEEE TMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA EHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECEEEECCCCCCEEEEE FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEA HHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEEECHHHHHHH KDYIASLICDGSIVCNGNTNSSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLI HHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEECCEEEEEECCCEEEECCCCCCEE RRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDVFIRAASSAKDDSNGTETNVP EEEECCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC GWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF CEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MLYNIPCRIYILSTLSLCISGIVSTATATSSETKISNEETLVVTTNRSASNLWESPATIQ CEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCEEE VIDQQTLQNSTNASIADNLQDIPGVEITDNSLAGRKQIRIRGEASSRVLILIDGQEVTYQ EEEHHHHCCCCCCCHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCEEEEEECCCEEEEE RAGDNYGVGLLIDESALERVEVVKGPYSVLYGSQAIGGIVNFITKKGGDKLASGVVKAVY ECCCCCCEEEEECHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH NSATAGWEESIAVQGSIGGFDYRINGSYSDQGNRDTPDGRLPNTNYRNNSQGVWLGYNSG HCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC NHRFGLSLDRYRLATQTYYEDPDGSYEAFSVKIPKLEREKVGVFYDTDVDGDYLKKIHFD CCEECCEEHHEEEEHHHEECCCCCCEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHH AYEQTIQRQFANEVKTTQPVPSPMIQALTVHNKTDTHDKQYTQAVTLQSHFSLPANNELV HHHHHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCCCCHHHHHEEEEHHHCCCCCCCCEE TGAQYKQDRVSQRSGGMTSSKSLTGFINKETRTRSYYESEQSTVSLFAQNDWQFADHWTW ECCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCEECCCEEE TMGVRQYWLSSKLTRGDGVSYTAGIISDTSLARESASDHEMVTSTSLRYSGFDNLELRAA EHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHCCCCCCCEEEECEEEECCCCCCEEEEE FAQGYVFPTLSQLFMQTSAGGSVTYGNPDLKAEHSNNFELGARYNGNQWLIDSAVYYSEA HHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCEEEEECHHHHHHH KDYIASLICDGSIVCNGNTNSSRSSYYYYDNIDRAKTWGLEISAEYNGWVFSPYISGNLI HHHHHHHHCCCEEEECCCCCCCCCEEEEECCCCCCEECCEEEEEECCCEEEECCCCCCEE RRQYETSTLKTTNTGEPAINGRIGLKHTLVMGQANIISDVFIRAASSAKDDSNGTETNVP EEEECCCEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC GWATLNFAVNTEFGNEDQYRINLALNNLTDKRYRTAHETIPAAGFNAAIGFVWNF CEEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]