| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hipA [H]
Identifier: 209400663
GI number: 209400663
Start: 2030001
End: 2031056
Strand: Reverse
Name: hipA [H]
Synonym: ECH74115_2121
Alternate gene names: 209400663
Gene position: 2031056-2030001 (Counterclockwise)
Preceding gene: 209400988
Following gene: 209398354
Centisome position: 36.45
GC content: 48.01
Gene sequence:
>1056_bases TTGTCAGAAATAGGGCGAGACAGCGTTGGTGCCGTGACGTTAATACCCGAAGACGAAACCGTAACGCGTCCGATAATGGC ATGGGAAAAGCTTACTGAAGTCAGACTTGAAGAAGTATTAACGGCTTATAAAGCAGATATCCCGCTAGGCATGATTAGAG AAGAAAATGACTTTCGCATCTCGGTTGCTGGCGCACAGGAGAAGACAGCACTGCTCAGAATAGGCAATGACTGGTGCATT CCGAAAGGAATAACGCCGACGACGCACATCATTAAATTACCGATTGGGGAAATCAGGCAGCCCAATGCGACGCTCGATCT CAGCCAAAGCGTTGATAATGAGTATTACTGTCTGCTGCTGGCGAAAGAACTTGGGTTGAATGTCCCGGACGCAGAAATCA TTAAAGCGGGAAATGTGCGCGCGTTAGCGGTCGAACGTTTTGACAGGCGTTGGAATGCTGAGCGAACGGTTTTACTTCGC TTGCCACAGGAGGATATGTGTCAGACATTCGGTTTACCTTCATCGGTGAAATATGAATCAGATGGAGGCCCAGGCATCGC GCGGATCATGGCTTTTTTGATGGGGTTCAGCGAGGCGCTTCGCGATCGTTATGATTTTATGAAATTCCAGGTCTTCCAGT GGTTGATTGGCGCAACGGATGGCCATGCAAAAAACTTCTCCGTATTTATTCAGGCTGGCGGCAGTTATCGACTCACGCCA TTTTACGACATCATTTCAGCATTTCCGGTCCTTGGCGGTACGGGAATACACATCAGCGATCTCAAACTGGCAATGGGGCT TAACGCATCCAAAGGCAAAAAAACGGCAATCGATAAAATTTATCCGCGACATTTTTTGGCGACAGCAAAGGTGCTGAGAT TCCCGGAAGTGCAGATGCATGAAATCCTGAGTGACTTTGCCAGAATGATTCCGGCAGCACTGGATAACGTGAAGACTTCA TTACCGACAGATTTTCCAGAGAACGTGGTGACGGCAGTTGAAACCAATGTGTTGAGGTTGCACGGTCGGTTAAGCCGAGA ATACGGTATTAAGTAA
Upstream 100 bases:
>100_bases GGCATGCGGCTTAATATTGCCAACTTCAAAAGGCTTTTAAAGCCTCCCTTTTATCCGCGATCGCGGATATCGCAGCGTTT ATCCCGTACAGTTTGATTTA
Downstream 100 bases:
>100_bases GAGTAAGATATGGGGTTTGGTCGTTGTTAATGAGCAGGACAATCATGACCGCCAACGACTAGATTCTCCCTTGGTTTATA TTGGTGCGCATAATGTATAT
Product: protein HipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSEIGRDSVGAVTLIPEDETVTRPIMAWEKLTEVRLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCI PKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLR LPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGFSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTP FYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTS LPTDFPENVVTAVETNVLRLHGRLSREYGIK
Sequences:
>Translated_351_residues MSEIGRDSVGAVTLIPEDETVTRPIMAWEKLTEVRLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCI PKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLR LPQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGFSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTP FYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTS LPTDFPENVVTAVETNVLRLHGRLSREYGIK >Mature_350_residues SEIGRDSVGAVTLIPEDETVTRPIMAWEKLTEVRLEEVLTAYKADIPLGMIREENDFRISVAGAQEKTALLRIGNDWCIP KGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLLAKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLRL PQEDMCQTFGLPSSVKYESDGGPGIARIMAFLMGFSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTPF YDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMHEILSDFARMIPAALDNVKTSL PTDFPENVVTAVETNVLRLHGRLSREYGIK
Specific function: Unbalanced or excessive expression of hipA is toxic to the cell [H]
COG id: COG3550
COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0665 [H]
Homologues:
Organism=Escherichia coli, GI1787785, Length=351, Percent_Identity=98.005698005698, Blast_Score=710, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012893 - InterPro: IPR012894 - InterPro: IPR017508 [H]
Pfam domain/function: PF07804 HipA_C; PF07805 HipA_N [H]
EC number: NA
Molecular weight: Translated: 39187; Mature: 39056
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIGRDSVGAVTLIPEDETVTRPIMAWEKLTEVRLEEVLTAYKADIPLGMIREENDFRI CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE SVAGAQEKTALLRIGNDWCIPKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLL EEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCCCCCEECHHCCCCCEEEEEE AKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLRLPQEDMCQTFGLPSSVKYES EHHHCCCCCCHHHEECCCEEEEHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCEEECC DGGPGIARIMAFLMGFSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEECCH FYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMH HHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH EILSDFARMIPAALDNVKTSLPTDFPENVVTAVETNVLRLHGRLSREYGIK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SEIGRDSVGAVTLIPEDETVTRPIMAWEKLTEVRLEEVLTAYKADIPLGMIREENDFRI CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE SVAGAQEKTALLRIGNDWCIPKGITPTTHIIKLPIGEIRQPNATLDLSQSVDNEYYCLLL EEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCHHHCCCCCCCEECHHCCCCCEEEEEE AKELGLNVPDAEIIKAGNVRALAVERFDRRWNAERTVLLRLPQEDMCQTFGLPSSVKYES EHHHCCCCCCHHHEECCCEEEEHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCEEECC DGGPGIARIMAFLMGFSEALRDRYDFMKFQVFQWLIGATDGHAKNFSVFIQAGGSYRLTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEECCH FYDIISAFPVLGGTGIHISDLKLAMGLNASKGKKTAIDKIYPRHFLATAKVLRFPEVQMH HHHHHHHHHCCCCCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH EILSDFARMIPAALDNVKTSLPTDFPENVVTAVETNVLRLHGRLSREYGIK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1715862; 9278503; 8021189 [H]