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The map label for this gene is fadI [H]

Identifier: 209400421

GI number: 209400421

Start: 3227432

End: 3228742

Strand: Reverse

Name: fadI [H]

Synonym: ECH74115_3485

Alternate gene names: 209400421

Gene position: 3228742-3227432 (Counterclockwise)

Preceding gene: 209395983

Following gene: 209400826

Centisome position: 57.95

GC content: 55.84

Gene sequence:

>1311_bases
ATGGGTCAGGTTTTACCGCTGGTTACCCGCCAGGGCGATCGTATCGCCATTGTTAGCGGTTTACGTACGCCTTTTGCCCG
CCAGGCGACGGCTTTTCATGGCATTCCCGCGGTTGATTTAGGGAAGATGGTGGTAGGCGAACTGCTGGCACGCAGCGAGA
TCCCCGCCGAAGTGATTGAACAACTGGTCTTTGGTCAGGTCGTACAAATGCCTGAAGCTCCCAACATTGCGCGTGAAATT
GTTCTCGGTACTGGAATGAATGTGCATACCGATGCTTACAGCGTCAGCCGCGCTTGCGCTACCAGTTTCCAGGCGGTTGC
AAACGTCGTAGAAAGCCTGATGGCGGGGACTATCCGAGCGGGGATTGCCGGTGGGGCAGATTCCTCTTCGGTATTGCCAA
TTGGCGTCAGTAAAAAACTGGCGCGCGTGCTGGTTGATGTCAACAAAGCCCGCACAATGAGCCAGCGTCTGAAACTCTTC
TCTCGCCTGCGTTTGCGCGACTTAATGCCCGTACCACCTGCGGTAGCAGAATATTCTACCGGCTTGCGGATGGGCGACAC
TGCAGAGCAAATGGCGAAAACCTACGGCATCACCCGAGAACAGCAAGATGCATTAGCGCACCGTTCGCATCAGCGTGCCG
CTCAGGCATGGTCAGACGGAAAACTCAAAGAAGAGGTGATGACTGCCTTTATCCCTCCTTATAAACAACTGCTCGCGGAA
GACAACAATATTCGCGGTAATTCCTCGCTTGCTGATTTCGCAAAGCTGCGTCCGGCGTTTGATCGTAAACACGGAACGGT
AACGGCGGCGAACAGTACGCCGCTGACCGATGGCGCAGCGGCGGTGATCCTGATGACTGAATCCCGGGCGAAAGAATTAG
GGCTGGTACCGCTGGGATATCTGCGCAGCTACGCATTTACCGCTATCGATGTCTGGCAGGACATGTTGCTCGGTCCAGCC
TGGTCAACACCGCTGGCGCTGGAGCGTGCCGGTTTGACAATGGCAGATCTGACATTGATTGATATGCACGAAGCCTTTGC
CGCCCAGACGTTGGCCAATATTCAGCTACTGGGTAGTGAACGTTTTGCTCGTGAAGCGCTGGGGCGTGCACATGCCACTG
GCGAAGTGGACGATAGCAAATTTAACGTGCTTGGCGGTTCGATTGCTTACGGGCATCCCTTCGCGGCGACCGGCGCGCGG
ATGATTACCCAGACATTGCATGAACTTCGCCGTCGCGGCGGTGGATTTGGTTTAGTTACCGCCTGTGCTGCCGGTGGGCT
TGGCGCGGCAATGGTTCTGGAGGCGGAATAA

Upstream 100 bases:

>100_bases
GCTCCCAATTTCCCTTTTCTCCGCTTGGCTAAATGTAAAAAAATGGTTAAGACTATGATCAGGTCAGACCACTTTATTTA
TTTTTTTACAGGGGAGTGTT

Downstream 100 bases:

>100_bases
TGGAAATGACATCAGCGTTTACTCTTAATGTTCGTCTGGACAACATTGCTATCATCACCATCGACGTACCGGGTGAGAAA
ATGAATACCCTGAAGGCGGA

Product: 3-ketoacyl-CoA thiolase

Products: NA

Alternate protein names: ACSs; Acetyl-CoA acyltransferase; Acyl-CoA ligase; Beta-ketothiolase; Fatty acid oxidation complex subunit beta [H]

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREI
VLGTGMNVHTDAYSVSRACATSFQAVANVVESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAE
DNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPA
WSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGAR
MITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE

Sequences:

>Translated_436_residues
MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREI
VLGTGMNVHTDAYSVSRACATSFQAVANVVESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAE
DNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPA
WSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGAR
MITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE
>Mature_435_residues
GQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIV
LGTGMNVHTDAYSVSRACATSFQAVANVVESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFS
RLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAED
NNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLLGPAW
STPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSERFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARM
ITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE

Specific function: Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed [H]

COG id: COG0183

COG function: function code I; Acetyl-CoA acetyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiolase family [H]

Homologues:

Organism=Homo sapiens, GI4504327, Length=421, Percent_Identity=42.0427553444181, Blast_Score=340, Evalue=1e-93,
Organism=Homo sapiens, GI4557237, Length=424, Percent_Identity=29.7169811320755, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI4501853, Length=430, Percent_Identity=32.093023255814, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI167614485, Length=424, Percent_Identity=30.4245283018868, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI148539872, Length=427, Percent_Identity=29.9765807962529, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI194353979, Length=106, Percent_Identity=38.6792452830189, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1788683, Length=436, Percent_Identity=98.8532110091743, Blast_Score=875, Evalue=0.0,
Organism=Escherichia coli, GI1788554, Length=423, Percent_Identity=35.4609929078014, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI87082165, Length=422, Percent_Identity=32.7014218009479, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI48994986, Length=432, Percent_Identity=34.4907407407407, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1787663, Length=426, Percent_Identity=32.8638497652582, Blast_Score=184, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17551802, Length=423, Percent_Identity=38.7706855791962, Blast_Score=302, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI133906874, Length=426, Percent_Identity=30.9859154929577, Blast_Score=180, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI25147385, Length=420, Percent_Identity=28.3333333333333, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17535921, Length=424, Percent_Identity=28.7735849056604, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17535917, Length=420, Percent_Identity=24.047619047619, Blast_Score=89, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6325229, Length=437, Percent_Identity=30.2059496567506, Blast_Score=170, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6322031, Length=436, Percent_Identity=27.7522935779816, Blast_Score=159, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17137578, Length=430, Percent_Identity=41.1627906976744, Blast_Score=320, Evalue=2e-87,
Organism=Drosophila melanogaster, GI24655093, Length=422, Percent_Identity=29.3838862559242, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24640423, Length=426, Percent_Identity=27.4647887323944, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI17648125, Length=430, Percent_Identity=28.8372093023256, Blast_Score=162, Evalue=6e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012806
- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020615
- InterPro:   IPR020610
- InterPro:   IPR020617
- InterPro:   IPR020613
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: =2.3.1.16 [H]

Molecular weight: Translated: 46515; Mature: 46384

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00098 THIOLASE_1 ; PS00737 THIOLASE_2 ; PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIE
CCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVVESLMAGTIRA
HHHHHHHHCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYST
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAE
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCC
DNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGY
CCCCCCCCHHHHHHHHCHHHHCCCCEEEECCCCCCCCCCEEEEEEECCHHHHCCCCCHHH
LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
RFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
ACAAGGLGAAMVLEAE
HHHCCCCCEEEEEECC
>Mature Secondary Structure 
GQVLPLVTRQGDRIAIVSGLRTPFARQATAFHGIPAVDLGKMVVGELLARSEIPAEVIE
CCCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATSFQAVANVVESLMAGTIRA
HHHHHHHHCCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLFSRLRLRDLMPVPPAVAEYST
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWSDGKLKEEVMTAFIPPYKQLLAE
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCC
DNNIRGNSSLADFAKLRPAFDRKHGTVTAANSTPLTDGAAAVILMTESRAKELGLVPLGY
CCCCCCCCHHHHHHHHCHHHHCCCCEEEECCCCCCCCCCEEEEEEECCHHHHCCCCCHHH
LRSYAFTAIDVWQDMLLGPAWSTPLALERAGLTMADLTLIDMHEAFAAQTLANIQLLGSE
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH
RFAREALGRAHATGEVDDSKFNVLGGSIAYGHPFAATGARMITQTLHELRRRGGGFGLVT
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHH
ACAAGGLGAAMVLEAE
HHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA