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The map label for this gene is ydgA [H]

Identifier: 209400318

GI number: 209400318

Start: 2195948

End: 2197456

Strand: Direct

Name: ydgA [H]

Synonym: ECH74115_2324

Alternate gene names: 209400318

Gene position: 2195948-2197456 (Clockwise)

Preceding gene: 209400753

Following gene: 209400964

Centisome position: 39.41

GC content: 49.04

Gene sequence:

>1509_bases
ATGAATAAATCGCTGGTAGCGGTAGGCGTCATTGTTGCGCTAGGCGTAGTCTGGACAGGCGGCGCATGGTATACAGGCAA
GAAGATTGAAACCCATCTCGAAGACATGGTCGCGCAGGCGAACGCGCAACTCAAACTGACCGCTCCTGAATCCAACCTGG
AAGTGAGTTATCAAAACTATCATCGCGGCGTATTCAGCAGTCAGCTGCAACTGTTGGTGAAACCCATTGCCGGAAAAGAA
AATCCGTGGATTAAAAGCGGTCAGAGCGTCATCTTCAACGAATCGGTTGATCATGGTCCCTTCCCCCTTGCCCAGCTTAA
AAAACTGAACCTGATCCCGTCGATGGCATCAATTCAAACCACGCTGGTTAATAACGAAGTAAGCAAACCACTGTTTGATA
TGGCAAAAGGTGAAACGCCTTTTGAGATTAACTCGCGCATTGGTTACAGCGGTGATTCCAGTTCCGATATTTCGCTCAAG
CCACTAAATTACGAGCAAAAGGATGAAAAAGTCGCCTTTAGCGGCGGCGAGTTCCAGTTAAATGCGGACAGAGACGGCAA
AGCTATCTCCCTTTCCGGGGAGGCGCAAAGTGGTCGGATAGACGCGGTTAACGAATACAACCAGAAAGTACAGTTGACCT
TTAATAATCTGAAAACCGACGGTTCCAGCACGCTGGCAAGTTTTGGTGAGCGCGTAGGAAACCAAAAACTGTCACTGGTA
AAAATGACCATTTCAGTGGAAGGCAAAGAACTGGCACTGCTGGAAGGCATGGAGATCAGCGGTAAATCGGATCTGGTCAA
TGACGGTAAAACGATCAATAGCCAACTGGATTACTCGCTAAACAGCCTGAAGGTACAGAATCAGGATCTGGGCAGCGGCA
AGCTGACTTTAAAAGTCGGCCAAATTGATGGCGAAGCCTGGCATCAGTTTAGCCAGCAATATAACGCGCAAACTCAGGCG
CTGCTGGCACAGCCAGAAATTGCCAACAATCCCGAACTTTATCAGGAGAAAGTGACGGAAGCCTTCTTTAGCGCCCTGCC
GCTGATGTTGAAAGGCGATCCGGTGATTACTATCGCGCCGCTAAGCTGGAAAAACAGTCAGGGTGAAAGTGCGCTGAATC
TGTCGCTGTTCCTGAAAGATCCGGCAACGACTAAAGAAGCGCCGCAAACGCTGGCGCAGGAAGTAGATCGTTCGGTTAAA
TCTCTGGATGCGAAACTGACCATTCCGGTGGATATGGCAACTGAGTTGATGACTCAGGTAGCGAAGCTGGAAGGTTATCA
GGAAGATCAAGCGAAAAAACTGGCGAAACAGCAAGTTGAAGGTGCATCAGCAATGGGGCAGATGTTCCGTCTGACCACCT
TGCAGGACAATACCATCACCACCAGCCTGCAATATACTAACGGTCAGATAACGTTAAACGGGCAGAAAATGCCACTGGAA
GATTTCGTTGGTATGTTTGCAATGCCGGCATTAAATGTTCCGGTCGTACCCGCTATTCCGCAGCAGTAA

Upstream 100 bases:

>100_bases
GAGCTTACTGAAAAAATTAACATCTCTTGCTAAGCTTATTAAAGGCTTATAACACCTTCAGGCGGCCAGTCCGCCTGATT
TCATTTTATGGATAATCATT

Downstream 100 bases:

>100_bases
TTCACAGCCAAAACGCCGGAGATTTTTCTCTCCGGCGTTATTTTTTACTTCAGCATAAAGTCATACTGAATACTCATTTT
CACATCCCAGTAATTCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLV
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE
DFVGMFAMPALNVPVVPAIPQQ

Sequences:

>Translated_502_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLV
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE
DFVGMFAMPALNVPVVPAIPQQ
>Mature_502_residues
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKE
NPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLV
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQA
LLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVK
SLDAKLTIPVDMATELMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE
DFVGMFAMPALNVPVVPAIPQQ

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side. Note=Has been isolated in association with the inner membrane, suggesting it may be tethered to the membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yihF and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI1787900, Length=502, Percent_Identity=99.003984063745, Blast_Score=1009, Evalue=0.0,
Organism=Escherichia coli, GI87082339, Length=479, Percent_Identity=34.2379958246347, Blast_Score=267, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 54694; Mature: 54694

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY
CCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHH
HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT
HCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH
TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQL
HHHCCHHCCCHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEE
NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLV
ECCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG
EEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCHHCCCCCCEEEECCCCCCCEEEEEEE
QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP
CCCCHHHHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATELMTQV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCEEEECCCCCCHH
DFVGMFAMPALNVPVVPAIPQQ
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQLKLTAPESNLEVSYQNY
CCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCEEEEECCCCCCEEEHHHH
HRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFPLAQLKKLNLIPSMASIQT
HCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH
TLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLKPLNYEQKDEKVAFSGGEFQL
HHHCCHHCCCHHHHHCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCEEEE
NADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLKTDGSSTLASFGERVGNQKLSLV
ECCCCCCEEEECCCCCCCCCCCHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEE
KMTISVEGKELALLEGMEISGKSDLVNDGKTINSQLDYSLNSLKVQNQDLGSGKLTLKVG
EEEEEECCCEEEEEECCCCCCCCCCCCCCCEECCHHCCCCCCEEEECCCCCCCEEEEEEE
QIDGEAWHQFSQQYNAQTQALLAQPEIANNPELYQEKVTEAFFSALPLMLKGDPVITIAP
CCCCHHHHHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEE
LSWKNSQGESALNLSLFLKDPATTKEAPQTLAQEVDRSVKSLDAKLTIPVDMATELMTQV
CCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
AKLEGYQEDQAKKLAKQQVEGASAMGQMFRLTTLQDNTITTSLQYTNGQITLNGQKMPLE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEEEECCEEEECCCCCCHH
DFVGMFAMPALNVPVVPAIPQQ
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]