| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400284
Identifier: 209400284
GI number: 209400284
Start: 3256575
End: 3257789
Strand: Reverse
Name: 209400284
Synonym: ECH74115_3513
Alternate gene names: NA
Gene position: 3257789-3256575 (Counterclockwise)
Preceding gene: 209400517
Following gene: 209396476
Centisome position: 58.47
GC content: 51.69
Gene sequence:
>1215_bases ATGACGACTGTAACATCAGCCCAGGCGAATAAGCTGTATCAGGTGGCGCTTTTTACCGCTGCCAACCGCAACCGCTCGAT GGTAAATATCCTCACTGAACAGCAGGAAGCGCCAAAAGCGGTTTCGCCGGACAAGAAAAGCACGAAGCAGACCAGCGCGG GTGCGCCGGTTGTCCGTATCACAGACCTTAACAAACAGGCCGGTGATGAAGTGACCTTCAGCATCATGCACAAACTCTCA AAACGTCCGACGATGGGAGATGAGCGTGTTGAAGGTCGTGGTGAGGATCTCAGCCATGCTGACTTCTCCCTGAAAATCAA TCAGGGACGTCACCTGGTGGATGCAGGCGGACGTATGAGTCAGCAGCGCACGAAGTTTAACCTGGCATCCTCAGCCAGAA CGCTTCTGGGGACGTACTTTAATGACCTGCAGGACCAGTGTGCGATAGTGCATCTTGCTGGAGCTCGTGGTGATTTTGTT GCTGACGACACTATTCTGCCGACAGCGGAGCACCCTGAATTCAAAAAAATCATGATCAACGATGTACTGCCTCCGACACA TGACCGTCACTTTTTTGGCGGTGATGCGACAAGCTTTGAGCAGATTGAAGCGGCAGATATTTTTTCTATTGGCCTGGTGG ACAATCTCTCCCTGTTCATTGACGAAATGGCGCATCCGTTACAGCCGGTTCGTCTGTCCGGTGATGAACTTCACGGAGAA GATCCATATTACGTCCTGTACGTCACGCCGCGTCAGTGGAATGACTGGTACACCTCGACGTCCGGTAAGGACTGGAACCA GATGATGGTTCGTGCCGTGAACCGTGCAAAAGGTTTTAATCATCCGCTGTTCAAAGGTGAATGTGCGATGTGGCGCAATA TCCTGGTTCGTAAGTATGCGGGTATGCCGATCCGTTTCTATCAGGGGTCAAAGGTTCTGGTATCAGAGAATAACCTGACG GCAACCACGAAAGAGGTCGCTGCTGCAACCAATATTGACCGCGCCATGTTACTGGGGGCTCAGGCGCTGGCAAATGCTTA CGGTCAGAAGGCGGGCGGTCACTTCAACATGGTTGAGAAGAAAACGGATATGGATAACCGTACTGAGATAGCAATCAGCT GGATCAACGGTCTGAAAAAAATCCGTTTCCCCGAGAAGAGCGGCAAGATGCAGGATCACGGCGTGATTGCCGTTGATACA GCAGTGAAGCTCTGA
Upstream 100 bases:
>100_bases CTCATTCAGAGGCAGAGGCGATTATGCGCGGTATGACGAATGCTGAAATAGACGCGCTTCTGGAGAAGCTCGGGTAACTT ACTGAAGGAGAACTGAAGTA
Downstream 100 bases:
>100_bases TTTTTTCCTTTCCCTATGCCGGGTTTTCGCCCGGCTTTTTCAGGAGTCATTAATTATGGCAAAGACTATCCTTGCCCCGT CACTGAGTGAACGGGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTTVTSAQANKLYQVALFTAANRNRSMVNILTEQQEAPKAVSPDKKSTKQTSAGAPVVRITDLNKQAGDEVTFSIMHKLS KRPTMGDERVEGRGEDLSHADFSLKINQGRHLVDAGGRMSQQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFV ADDTILPTAEHPEFKKIMINDVLPPTHDRHFFGGDATSFEQIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGE DPYYVLYVTPRQWNDWYTSTSGKDWNQMMVRAVNRAKGFNHPLFKGECAMWRNILVRKYAGMPIRFYQGSKVLVSENNLT ATTKEVAAATNIDRAMLLGAQALANAYGQKAGGHFNMVEKKTDMDNRTEIAISWINGLKKIRFPEKSGKMQDHGVIAVDT AVKL
Sequences:
>Translated_404_residues MTTVTSAQANKLYQVALFTAANRNRSMVNILTEQQEAPKAVSPDKKSTKQTSAGAPVVRITDLNKQAGDEVTFSIMHKLS KRPTMGDERVEGRGEDLSHADFSLKINQGRHLVDAGGRMSQQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFV ADDTILPTAEHPEFKKIMINDVLPPTHDRHFFGGDATSFEQIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGE DPYYVLYVTPRQWNDWYTSTSGKDWNQMMVRAVNRAKGFNHPLFKGECAMWRNILVRKYAGMPIRFYQGSKVLVSENNLT ATTKEVAAATNIDRAMLLGAQALANAYGQKAGGHFNMVEKKTDMDNRTEIAISWINGLKKIRFPEKSGKMQDHGVIAVDT AVKL >Mature_403_residues TTVTSAQANKLYQVALFTAANRNRSMVNILTEQQEAPKAVSPDKKSTKQTSAGAPVVRITDLNKQAGDEVTFSIMHKLSK RPTMGDERVEGRGEDLSHADFSLKINQGRHLVDAGGRMSQQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFVA DDTILPTAEHPEFKKIMINDVLPPTHDRHFFGGDATSFEQIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGED PYYVLYVTPRQWNDWYTSTSGKDWNQMMVRAVNRAKGFNHPLFKGECAMWRNILVRKYAGMPIRFYQGSKVLVSENNLTA TTKEVAAATNIDRAMLLGAQALANAYGQKAGGHFNMVEKKTDMDNRTEIAISWINGLKKIRFPEKSGKMQDHGVIAVDTA VKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44906; Mature: 44774
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVTSAQANKLYQVALFTAANRNRSMVNILTEQQEAPKAVSPDKKSTKQTSAGAPVVRI CCCCCCCHHCCEEEEEEEEECCCCCCEEEEEHHHHCCCCCCCCCCHHCCCCCCCCCEEEE TDLNKQAGDEVTFSIMHKLSKRPTMGDERVEGRGEDLSHADFSLKINQGRHLVDAGGRMS ECCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCH QQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFVADDTILPTAEHPEFKKIMIN HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHH DVLPPTHDRHFFGGDATSFEQIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGE CCCCCCCCCCEECCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCC DPYYVLYVTPRQWNDWYTSTSGKDWNQMMVRAVNRAKGFNHPLFKGECAMWRNILVRKYA CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC GMPIRFYQGSKVLVSENNLTATTKEVAAATNIDRAMLLGAQALANAYGQKAGGHFNMVEK CCCEEEECCCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC KTDMDNRTEIAISWINGLKKIRFPEKSGKMQDHGVIAVDTAVKL CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEECCEECC >Mature Secondary Structure TTVTSAQANKLYQVALFTAANRNRSMVNILTEQQEAPKAVSPDKKSTKQTSAGAPVVRI CCCCCCHHCCEEEEEEEEECCCCCCEEEEEHHHHCCCCCCCCCCHHCCCCCCCCCEEEE TDLNKQAGDEVTFSIMHKLSKRPTMGDERVEGRGEDLSHADFSLKINQGRHLVDAGGRMS ECCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEEECCCCCH QQRTKFNLASSARTLLGTYFNDLQDQCAIVHLAGARGDFVADDTILPTAEHPEFKKIMIN HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCCCHHHHHHH DVLPPTHDRHFFGGDATSFEQIEAADIFSIGLVDNLSLFIDEMAHPLQPVRLSGDELHGE CCCCCCCCCCEECCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCC DPYYVLYVTPRQWNDWYTSTSGKDWNQMMVRAVNRAKGFNHPLFKGECAMWRNILVRKYA CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC GMPIRFYQGSKVLVSENNLTATTKEVAAATNIDRAMLLGAQALANAYGQKAGGHFNMVEK CCCEEEECCCEEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC KTDMDNRTEIAISWINGLKKIRFPEKSGKMQDHGVIAVDTAVKL CCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA