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The map label for this gene is yjiH

Identifier: 209400264

GI number: 209400264

Start: 5488467

End: 5489150

Strand: Reverse

Name: yjiH

Synonym: ECH74115_5838

Alternate gene names: 209400264

Gene position: 5489150-5488467 (Counterclockwise)

Preceding gene: 209396495

Following gene: 209398485

Centisome position: 98.51

GC content: 52.63

Gene sequence:

>684_bases
ATGACACAACAAGGGGATGCTGTAGCCGGGGAGCTGGCGACAGAAAAAGTGGGCATTAAAGGGTATCTGGCTTTTTTTCT
CACCATAATCTTTTTTTCCGGTGTTTTTTCCGGAACAGACAGCTGGTGGCGCGTTTTTGATTTTTCCGTTCTGAACGGAT
CGTTTGGGCAACTGCCTGGTGCGAATGGAGCCACCACCTCATTTCGCGGCGCGGGTGGCGCGGGGGCTAAAGATGGCTTT
CTCTTTGCGCTGGAGCTGGCACCGTCAGTCATTCTCTCTCTGGGGATTATTTCAATTACCGATGGTCTTGGTGGATTACG
CGCCGCGCAGCAGTTAATGACACCTGTGCTAAAACCGTTGTTGGGCATTCCAGGGATCTGCTCGCTGGCGCTGATCGCTA
ACTTGCAAAACACTGATGCCGCCGCCGGTATGACCAAAGAGCTGGCGCAGGAAGGTGAAATTACCGAACGCGATAAAGTG
ATTTTCGCCGCATATCAAACCAGCGGTAGCGCCATCATCACCAACTACTTCTCTTCCGGCGTCGCGGTGTTCGCCTTTCT
GGGCACGTCCGTAATCGTACCTTTAGCCGTCATCCTGGTGTTTAAATTTGTCGGAGCCAACATTTTGCGCGTCTGGCTTA
ACTTCGAAGAACGTCGCAACCCAACGCAAGGAGCGCAAGCATGA

Upstream 100 bases:

>100_bases
TGCATTTTCCCCATACCCACATGGCTGATAAGGTTTTTAAGTTCCAGGAATTTTCCTGGCTCAAGCAACACACAAACACA
AAAAAACAATGGGGATTGTT

Downstream 100 bases:

>100_bases
CAACTCAGGTCCGCAAAAACGTCATGGATATGTTTATCGATGGCGCGCGCCGTGGCTTTACTATCGCCACGACCAACCTG
CTGCCAAACGTGGTGATGGC

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGF
LFALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKV
IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA

Sequences:

>Translated_227_residues
MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGF
LFALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKV
IFAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
>Mature_226_residues
TQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPGANGATTSFRGAGGAGAKDGFL
FALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPLLGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVI
FAAYQTSGSAIITNYFSSGVAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA

Specific function: Unknown

COG id: COG3314

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082423, Length=227, Percent_Identity=100, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJIH_ECOLI (P39379)

Other databases:

- EMBL:   U14003
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004822.1
- RefSeq:   NP_418750.2
- ProteinModelPortal:   P39379
- STRING:   P39379
- EnsemblBacteria:   EBESCT00000004668
- EnsemblBacteria:   EBESCT00000015945
- GeneID:   948856
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5783
- KEGG:   eco:b4330
- EchoBASE:   EB2457
- EcoGene:   EG12569
- eggNOG:   COG3314
- GeneTree:   EBGT00050000010512
- HOGENOM:   HBG416621
- OMA:   QSNEWYG
- ProtClustDB:   CLSK869878
- BioCyc:   EcoCyc:G7927-MONOMER
- Genevestigator:   P39379
- InterPro:   IPR011642

Pfam domain/function: PF07670 Gate

EC number: NA

Molecular weight: Translated: 23794; Mature: 23662

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xff51c60)-; HASH(0xee98714)-; HASH(0x13bba2e0)-; HASH(0x13c8414c)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPG
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
ANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPL
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSG
HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHH
VAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCH
>Mature Secondary Structure 
TQQGDAVAGELATEKVGIKGYLAFFLTIIFFSGVFSGTDSWWRVFDFSVLNGSFGQLPG
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
ANGATTSFRGAGGAGAKDGFLFALELAPSVILSLGIISITDGLGGLRAAQQLMTPVLKPL
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LGIPGICSLALIANLQNTDAAAGMTKELAQEGEITERDKVIFAAYQTSGSAIITNYFSSG
HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEHHHHHHH
VAVFAFLGTSVIVPLAVILVFKFVGANILRVWLNFEERRNPTQGAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503