| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is frlC [H]
Identifier: 209400169
GI number: 209400169
Start: 4325336
End: 4326163
Strand: Direct
Name: frlC [H]
Synonym: ECH74115_4684
Alternate gene names: 209400169
Gene position: 4325336-4326163 (Clockwise)
Preceding gene: 209396714
Following gene: 209399098
Centisome position: 77.63
GC content: 54.95
Gene sequence:
>828_bases ATGAAAACAGGTATGTTTACCTGCGGCCACCAGCGGCTGCCTATTGAACATGCATTCCGTGATGCAAGCGAGCTGGGTTA CGATGGCATCGAAATTTGGGGCGGCCGCCCGCACGCGTTCGCGCCGGACTTAAAAGCGGGCGGCATCAAACAAATCAAGG CGCTGGCGCAGACGTATCAGATGCCGATTATCGGTTACACGCCAGAAACCAACGGCTATCCGTATAACATGATGCTGGGC GATGAACATATGCGTCGTGAAAGCCTGGACATGATCAAGCTGGCGATGGATATGGCAAAAGAGATGAACGCGGGTTATAC GCTGATTTCTGCGGCCCACGCGGGCTATCTCACGCCGCCTAACGTTATCTGGGGGCGGCTGGCAGAGAACTTAAGCGAAC TGTGTGAGTACGCGGAAAACATCGGCATGGATCTGATCCTCGAACCGTTAACGCCGTATGAATCGAACGTCGTGTGTAAT GCTAATGATGTGCTTCATGCGCTGGCGCTGGTGCCTTCGCCGCGCCTGTTCAGCATGGTCGACATTTGCGCGCCGTATGT CCAGGCGGAACCGGTGATGAGTTATTTCGACAAACTGGGCGATAAATTACGTCATCTGCATATTGTCGACAGCGACGGGG CCAGCGACACGCATTACATTCCCGGCGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGATCGGGGCTAT GAGGGATACTGCACAGTGGAACTGGTAACCATGTATATGAACGAGCCCAGACTTTACGCCCGCCAGGCGCTGGAACGCTT TCGCGCGCTGCTGCCGGAGGATGAGTGA
Upstream 100 bases:
>100_bases ATCACAACCCGGATGAACGCCGCTATTACGGTGGTCTGGTGGAATATTAATCCTCTCTCCCGGCCCGGCAACGGGCCGGA TTTACGCAAGGAGTTACCCG
Downstream 100 bases:
>100_bases TGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCG GTGAACGTGGCGGTGTACTG
Product: fructoselysine 3-epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLG DEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY EGYCTVELVTMYMNEPRLYARQALERFRALLPEDE
Sequences:
>Translated_275_residues MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLG DEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY EGYCTVELVTMYMNEPRLYARQALERFRALLPEDE >Mature_275_residues MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLG DEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCN ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY EGYCTVELVTMYMNEPRLYARQALERFRALLPEDE
Specific function: Not clear, may be involved in an isomerization step [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994933, Length=275, Percent_Identity=99.6363636363636, Blast_Score=569, Evalue=1e-164,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 30999; Mature: 30999
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQ CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC MPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPP CCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCH NVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMV HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHHCCCCHHHHHH DICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC EGYCTVELVTMYMNEPRLYARQALERFRALLPEDE CCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQ CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHC MPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEMNAGYTLISAAHAGYLTPP CCEEEECCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCH NVIWGRLAENLSELCEYAENIGMDLILEPLTPYESNVVCNANDVLHALALVPSPRLFSMV HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHHCCCCHHHHHH DICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTHYIPGEGKMPLRELMRDIIDRGY HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCC EGYCTVELVTMYMNEPRLYARQALERFRALLPEDE CCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 12147680 [H]