Click here to switch to the map view.

The map label for this gene is renD [H]

Identifier: 209400117

GI number: 209400117

Start: 3279140

End: 3279430

Strand: Reverse

Name: renD [H]

Synonym: ECH74115_3551

Alternate gene names: 209400117

Gene position: 3279430-3279140 (Counterclockwise)

Preceding gene: 209400536

Following gene: 209399346

Centisome position: 58.85

GC content: 51.2

Gene sequence:

>291_bases
ATGACGGGCAAAGAGGCAATTATTCATTACCTGGGGACGCATAATAGCTTCTGTGCGCCGGACGTTGCCGCGCTAACAGG
CGCAACAGTAACCAGCATAAATCAGGCCGCAGCTAAAATGGCACGGGCAGGTCTTCTGGTTATCGAAGGTAAGGTCTGGC
GAACGGTGTATTACCGGTTTGCTACCAGGGAAGAACGGGAAGGAAAGGTGAGCACGAACCTGATTTTTAAGGAGTGTCGC
CAGAGTGCCGCGATGAAACGGGTATTGGCGGTATATGGAGTTAAAAGATGA

Upstream 100 bases:

>100_bases
AACAACTTCCTGTCATGGGCGGCAGACCTCTAAATCGTGTTCAGGCGCTGGCGAAGATCGCAGAAATTAAAGCTAAGTTC
GGACTGAAAGGAGCAAGTGT

Downstream 100 bases:

>100_bases
CCATCTACATCACTGAGCTAATGACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGGGGAGAGGGAAGTGAACGATA
GCTACCGACAGTTTGAAAAC

Product: Ren protein

Products: H2O; 2-oxopent-4-enoate [C]

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRFATREEREGKVSTNLIFKECR
QSAAMKRVLAVYGVKR

Sequences:

>Translated_96_residues
MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRFATREEREGKVSTNLIFKECR
QSAAMKRVLAVYGVKR
>Mature_95_residues
TGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRFATREEREGKVSTNLIFKECRQ
SAAMKRVLAVYGVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10593; Mature: 10462

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRF
CCCHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
ATREEREGKVSTNLIFKECRQSAAMKRVLAVYGVKR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGKEAIIHYLGTHNSFCAPDVAALTGATVTSINQAAAKMARAGLLVIEGKVWRTVYYRF
CCHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
ATREEREGKVSTNLIFKECRQSAAMKRVLAVYGVKR
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-hydroxy-2-ketovalerate [C]

Specific reaction: 4-hydroxy-2-ketovalerate = H2O + 2-oxopent-4-enoate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]