| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hcaF [H]
Identifier: 209400100
GI number: 209400100
Start: 3495008
End: 3495526
Strand: Direct
Name: hcaF [H]
Synonym: ECH74115_3771
Alternate gene names: 209400100
Gene position: 3495008-3495526 (Clockwise)
Preceding gene: 209400112
Following gene: 209397149
Centisome position: 62.72
GC content: 52.41
Gene sequence:
>519_bases ATGAGTGCGCAAGTTTCACTAGAGTTACATCACCGCATTAGCCAGTTTCTCTTTCACGAAGCCAGCTTACTGGACGACTG GAAATTTCGTGACTGGCTGGCACAGCTCGACGAAGAGATTTGTTACACCATGCGCACCACGGTGAACGCGCAAACGCGCG ACCGCCGCAAAGGTGTTCAGCCGCCGACAACCTGGATTTTTAATGACACCAAAGACCAGCTGGAGCGGCGAATCGCCCGT CTGGAAACGGGCATGGCATGGGCAGAAGAGCCGCCGTCACGCACCCGCCACTTAATCAGCAACTGCCAGATAAGCGAAAC CGACATCCCAAACGTATTTGCTGTTCGGGTGAATTATCTGCTTTATCGGGCACAAAAAGAGCGCGATGAAACGTTCTATG TCGGGACTCGTTTTGACAAAGTTCGCCGTCTGGAAGATGACAACTGGCGCTTGCTGGAACGGGATATCGTCCTGGATCAA GCGGTAATCACTTCCCATAACCTGAGTGTACTGTTCTGA
Upstream 100 bases:
>100_bases CTGCTCGTGGAATGTACCAACGCTGGGCCGATCTTCTGAGTAGCGAAAGCTGGCAGGAAGTGCTCGATAAAACCGCCGCT TACCAGCAGGAGGTGATGAA
Downstream 100 bases:
>100_bases TGAATCGAATTTATGCGTGTCCCGTTGCGGATGTGCCGGAGGGTGAGGCTCTCCGGATCGATACCTCGCCCGTCATCGCC TTGTTCAACGTTGGCGGCGA
Product: 3-phenylpropionate dioxygenase subunit beta
Products: NA
Alternate protein names: Digoxigenin subunit beta [H]
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF
Sequences:
>Translated_172_residues MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIAR LETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ AVITSHNLSVLF >Mature_171_residues SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARL ETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQA VITSHNLSVLF
Specific function: Part of the multicomponent 3-phenylpropionate dioxygenase. Converts 3-phenylpropionic acid (PP) and cinnamic acid (CI) into 3-phenylpropionate-dihydrodiol (PP-dihydrodiol) and cinnamic acid-dihydrodiol (CI-dihydrodiol), respectively [H]
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase beta subunit family [H]
Homologues:
Organism=Escherichia coli, GI1788889, Length=172, Percent_Identity=99.4186046511628, Blast_Score=351, Evalue=2e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000391 [H]
Pfam domain/function: PF00866 Ring_hydroxyl_B [H]
EC number: =1.14.12.19 [H]
Molecular weight: Translated: 20526; Mature: 20395
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQ CCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC >Mature Secondary Structure SAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEICYTMRTTVNAQTRDRRKGVQ CCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC PPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQISETDIPNVFAVRVNYL CCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LYRAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQAVITSHNLSVLF HHHHHHCCCCEEEEECHHHHHHHCCCCCCEEHHHHHHHHHHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA