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The map label for this gene is ygeG [H]

Identifier: 209400096

GI number: 209400096

Start: 3818306

End: 3818797

Strand: Direct

Name: ygeG [H]

Synonym: ECH74115_4122

Alternate gene names: 209400096

Gene position: 3818306-3818797 (Clockwise)

Preceding gene: 209396618

Following gene: 209400373

Centisome position: 68.53

GC content: 32.93

Gene sequence:

>492_bases
ATGGACACAGAAACAATTGAAATATTCAATAATAGTGATGAATGGGCAAATCAACTAAAACACGCATTATCGAAAGGAGA
AAATCTGGCATTACTACATGGTTTGACTCCTGATATCCTTGATAGAATATATGCATATGCATTCGACTACCATGAAAAGG
GTAATGTAACGGACGCAGAAATTTATTATAAATTATTGTGCATTTATGCGTTCGAAAATCATGAATATCTAAAAGGTTTT
GCATCAGTATGTCAGTCAAAAAAGAAATATCAACAAGCATATGACCTTTACAAGCTAAGTTACAATTACTCCCCGTATGA
TGACTATTCAGTTATTTATCGTATGGGTCAATGTCAAATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATC
ATATTATTAACAATTGTGAGGATGCTAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAACCGATAATTCAGAA
GATAATGGCTAA

Upstream 100 bases:

>100_bases
GCAAGCTTAAAACTCATAATTTAAAAAAGATAAATATAAAAATATCAATGAGTCAATCAATAATAATTTAGCATCACGAG
ACACATCACAGAGGAATATT

Downstream 100 bases:

>100_bases
GCATTACAATCATTTGGTTAAAAATGCTGGTTATAGTGTAGTAACCACTATGACCAGCACCTCTTATGCTTTCTTAAATC
AACATCTTAAAACAGTTAAG

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNVTDAEIYYKLLCIYAFENHEYLKGF
ASVCQSKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDASVKSKAQAYIELLTDNSE
DNG

Sequences:

>Translated_163_residues
MDTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNVTDAEIYYKLLCIYAFENHEYLKGF
ASVCQSKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDASVKSKAQAYIELLTDNSE
DNG
>Mature_163_residues
MDTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNVTDAEIYYKLLCIYAFENHEYLKGF
ASVCQSKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCEDASVKSKAQAYIELLTDNSE
DNG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lcrH/sycD chaperone family [H]

Homologues:

Organism=Escherichia coli, GI1789215, Length=163, Percent_Identity=95.0920245398773, Blast_Score=319, Evalue=5e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005415
- InterPro:   IPR016379
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 18888; Mature: 18888

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNVTDAE
CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHH
IYYKLLCIYAFENHEYLKGFASVCQSKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCEE
GAKNIDNAMQCFYHIINNCEDASVKSKAQAYIELLTDNSEDNG
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDTETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGNVTDAE
CCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHH
IYYKLLCIYAFENHEYLKGFASVCQSKKKYQQAYDLYKLSYNYSPYDDYSVIYRMGQCQI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCEE
GAKNIDNAMQCFYHIINNCEDASVKSKAQAYIELLTDNSEDNG
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]