| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ymiA
Identifier: 209399943
GI number: 209399943
Start: 1802881
End: 1803009
Strand: Direct
Name: ymiA
Synonym: ECH74115_1908
Alternate gene names: 209399943
Gene position: 1802881-1803009 (Clockwise)
Preceding gene: 209399190
Following gene: 209396094
Centisome position: 32.36
GC content: 49.61
Gene sequence:
>129_bases ATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGC ACTTTTCTGGGTGGTTGTCGCACTGCTGATTTGGAAAGTGTGGGGATAA
Upstream 100 bases:
>100_bases TTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATG GCGATTATATGAGGTTAGCA
Downstream 100 bases:
>100_bases CTATGGTTGGTCAGGAGCAACTGGAGTCGTCACCATTATGCCAGCATAGTGACAATGAACCCGAAACGAAACGGGAATGT TCCGTCGTTATTCCAGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
Sequences:
>Translated_42_residues MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG >Mature_41_residues PSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081865, Length=42, Percent_Identity=100, Blast_Score=86, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YMIA_ECOLI (P0CB62)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - RefSeq: YP_588449.1 - EnsemblBacteria: EBESCT00000005200 - EnsemblBacteria: EBESCT00000151757 - GeneID: 1450256 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: eco:b4522 - EcoGene: EG14463 - GeneTree: EBGT00050000010998 - ProtClustDB: CLSK880130
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4866; Mature: 4735
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1fa55c18)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure PSGNQEPRRDPELKRKAWLAVFLGSALFWVVVALLIWKVWG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503