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The map label for this gene is rafY2

Identifier: 209399683

GI number: 209399683

Start: 4995038

End: 4996432

Strand: Direct

Name: rafY2

Synonym: ECH74115_5352

Alternate gene names: NA

Gene position: 4995038-4996432 (Clockwise)

Preceding gene: 209399359

Following gene: 209397166

Centisome position: 89.64

GC content: 45.23

Gene sequence:

>1395_bases
ATGAAAAAATCGACATTATCTTTAGCCATCGGTTTATTATTGGCATGTAGTACCGGTATGGCAAAAACACAGCATTTAAT
GCTGGAACAACGCATGGCATTGCTGGAAGAACGCCTGGAAGCGGCAGAAATGCGGGCGGCAAAAGCAGAGAGCCAGGTTA
AACAGCTGCAGACACAACAAGCCGCTGAGATCCGCGAAATTAAGGCCGCTCAGGGCAATACGCCGGTAAATGGACAGGCA
ACGGCGGAATCTGCAAAGAAAAATGCCACCTCACCTAATCTTTTGCTTTCAGGTTATGGCGATTTAAAAATCTACGGCGA
CGTAGAATTTAATATGGATGCGGAAAGTAATCATGGCCTGCTGGCAATGACCAACGCTGATGTGAATAGCGATCCCACTA
ATGAACAGTGGAATCTCAATGGTCGTATTCTGTTAGGTTTTGACGGTATGCGAAAGATGGACAACGGTTATTTCGCCGGG
TTCTCCGCACAACCGCTGGGTGATATGCACGGTTCAGTAAATATCGATGATGCGGTATTCTTCTTTGGCAAAGAAAACGA
CTGGAAGGTCAAAGTAGGCCGTTTTGAAGCCTACGATATGTTCCCATTGAATCAGGATACCTTTGTTGAACATTCCGGTA
ATACTGCGAACGATCTTTATGACGATGGCAGCGGTTATATCTATATGATGAAAGAGGGCCGCGGGCGCTCTAACGCTGGC
GGTAATTTCCTCGTCAGCAAACAACTCGATAACTGGTATTTTGAATTAAACACGTTACTTGAAGACGGAACATCTTTATA
TAATGACGGTAATTATCATGGACGCGATATGGAGCAGCAGAAAAATGTTGCTTATCTGCGCCCAGTAATTGCCTGGTCGC
CGACGGAAGAATTCACCGTTTCCGCAGCGATGGAAGCGAACGTGGTAAATAATGCTTATGGTTATACCGATAGCAAGGGT
AATTTTGTCGATCAGTCCGATCGTACCGGCTATGGTATGAGCATGACCTGGAACGGCCTGAAAACGGATCCGGACAATGG
CATTGTGGTTAATCTAAATACCGCCTATTTAGATGCTAATAATGAGAAAGATTTCACTGCCGGGATTAACGCGCTGTGGA
AACGTTTCGAGCTCGGTTATATCTACGCGCACAATAAGATTGATGAATTCAGCGGTGTAGTTTGTGATAACGACTGCTGG
ATTGATGATGAAGGGACGTACACCATTCACACCATTCATGCGTCTTATCAGTTCGCTAACGTGATGGATATGGAGAACTT
TAATATTTACCTCGGGACGTATTACTCCATTCTGGATAGCGACGGCGATAAAAAACACGGTGATGATACTGATGACCGTT
ACGGCGCACGCGTTCGCTTTAAATACTTCTTCTGA

Upstream 100 bases:

>100_bases
AAGTTGGATTAAAAATTCGAAAGTGCACACCTTATATTTCTCTATATACGTATTCCTTTTGGAAAGCGTAGGGTCTCCTT
TATTTCAGGGAACGTAAATA

Downstream 100 bases:

>100_bases
TGAAGTCGCGGTGCTGGATATTTTCCGGCACCGCAACTCATTAAGGCAGGTAAAACACTTCTTGCAGCTCGCTACTCACC
GGGCTGTTATCCGGGTTAGC

Product: glycoporin RafY

Products: NA

Alternate protein names: Glycoporin RafY; Glycoporin RfaY

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLMLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQAAEIREIKAAQGNTPVNGQA
TAESAKKNATSPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKMDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPDNGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYTIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKKHGDDTDDRYGARVRFKYFF

Sequences:

>Translated_464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLMLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQAAEIREIKAAQGNTPVNGQA
TAESAKKNATSPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKMDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPDNGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYTIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKKHGDDTDDRYGARVRFKYFF
>Mature_464_residues
MKKSTLSLAIGLLLACSTGMAKTQHLMLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQAAEIREIKAAQGNTPVNGQA
TAESAKKNATSPNLLLSGYGDLKIYGDVEFNMDAESNHGLLAMTNADVNSDPTNEQWNLNGRILLGFDGMRKMDNGYFAG
FSAQPLGDMHGSVNIDDAVFFFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTVSAAMEANVVNNAYGYTDSKG
NFVDQSDRTGYGMSMTWNGLKTDPDNGIVVNLNTAYLDANNEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCW
IDDEGTYTIHTIHASYQFANVMDMENFNIYLGTYYSILDSDGDKKHGDDTDDRYGARVRFKYFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51976; Mature: 51976

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSTLSLAIGLLLACSTGMAKTQHLMLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQ
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEIREIKAAQGNTPVNGQATAESAKKNATSPNLLLSGYGDLKIYGDVEFNMDAESNHGL
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCE
LAMTNADVNSDPTNEQWNLNGRILLGFDGMRKMDNGYFAGFSAQPLGDMHGSVNIDDAVF
EEEECCCCCCCCCCCEECCCCEEEEEECCCHHCCCCEEECCCCCCCCCCCCCCEECCEEE
FFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
EEECCCCEEEEEEEEEEEEECCCCCCCEEECCCCCHHCCCCCCCCEEEEEECCCCCCCCC
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTV
CCEEEEECCCCEEEEEHHHHHCCCHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCHHEEE
SAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPDNGIVVNLNTAYLDAN
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECC
NEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYTIHTIHASYQFAN
CCCCHHHHHHHHHHHHEEEEEEECCCCHHHCCEEECCCCEECCCCCEEEEEEEECEEEEE
VMDMENFNIYLGTYYSILDSDGDKKHGDDTDDRYGARVRFKYFF
EEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKKSTLSLAIGLLLACSTGMAKTQHLMLEQRMALLEERLEAAEMRAAKAESQVKQLQTQQ
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEIREIKAAQGNTPVNGQATAESAKKNATSPNLLLSGYGDLKIYGDVEFNMDAESNHGL
HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEEEEEEEEECCCCCCCE
LAMTNADVNSDPTNEQWNLNGRILLGFDGMRKMDNGYFAGFSAQPLGDMHGSVNIDDAVF
EEEECCCCCCCCCCCEECCCCEEEEEECCCHHCCCCEEECCCCCCCCCCCCCCEECCEEE
FFGKENDWKVKVGRFEAYDMFPLNQDTFVEHSGNTANDLYDDGSGYIYMMKEGRGRSNAG
EEECCCCEEEEEEEEEEEEECCCCCCCEEECCCCCHHCCCCCCCCEEEEEECCCCCCCCC
GNFLVSKQLDNWYFELNTLLEDGTSLYNDGNYHGRDMEQQKNVAYLRPVIAWSPTEEFTV
CCEEEEECCCCEEEEEHHHHHCCCHHCCCCCCCCCCHHHHCCEEEEEEEEEECCCHHEEE
SAAMEANVVNNAYGYTDSKGNFVDQSDRTGYGMSMTWNGLKTDPDNGIVVNLNTAYLDAN
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEECC
NEKDFTAGINALWKRFELGYIYAHNKIDEFSGVVCDNDCWIDDEGTYTIHTIHASYQFAN
CCCCHHHHHHHHHHHHEEEEEEECCCCHHHCCEEECCCCEECCCCCEEEEEEEECEEEEE
VMDMENFNIYLGTYYSILDSDGDKKHGDDTDDRYGARVRFKYFF
EEECCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA