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The map label for this gene is yjbQ

Identifier: 209399571

GI number: 209399571

Start: 5198585

End: 5199001

Strand: Direct

Name: yjbQ

Synonym: ECH74115_5559

Alternate gene names: 209399571

Gene position: 5198585-5199001 (Clockwise)

Preceding gene: 209400146

Following gene: 209399431

Centisome position: 93.3

GC content: 51.8

Gene sequence:

>417_bases
ATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCT
GGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGA
ACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCATGAC
TATGAGGGAGCAGACGATATGCCTTCTCATATCAAATCCTCAATGCTGGGAACATCGCTTGTATTGCCGGTGCATAAAGG
GCGTATTCAGACCGGCACCTGGCAAGGCATTTGGCTGGGGGAACATCGCATCCACGGCGGATCGCGTCGCATCATCGCGA
CACTACAAGGGGAGTAA

Upstream 100 bases:

>100_bases
GAGCGTGACACTCTCCCGAATGCTGTTTTTTTAATCACACCTTTATCCTTTCGCTGTCTTGCTGCAAACTGATTAAGAGA
GTTTTATCAAGGAGCAGCAC

Downstream 100 bases:

>100_bases
AAAATGACCATTTCGGAGTTGCTACAATATTGCATGGCAAAACCAGGCGCAGAACAGAGCGAGCATAACGACTGGAAAGC
GACGCAGATCAAAGTGGAAG

Product: conserved hypothetical protein TIGR00149

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Sequences:

>Translated_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
>Mature_138_residues
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHD
YEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=100, Blast_Score=287, Evalue=2e-79,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=48.5294117647059, Blast_Score=152, Evalue=5e-38,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=48.5294117647059, Blast_Score=152, Evalue=9e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJBQ_ECO57 (P0AF49)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B86099
- PIR:   F91258
- RefSeq:   NP_290689.1
- RefSeq:   NP_313065.1
- ProteinModelPortal:   P0AF49
- SMR:   P0AF49
- EnsemblBacteria:   EBESCT00000026494
- EnsemblBacteria:   EBESCT00000059477
- GeneID:   914297
- GeneID:   960068
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5655
- KEGG:   ecs:ECs5038
- GeneTree:   EBGT00050000011509
- HOGENOM:   HBG409904
- OMA:   IIQENAD
- ProtClustDB:   CLSK880832
- BioCyc:   ECOL83334:ECS5038-MONOMER
- InterPro:   IPR001602
- Gene3D:   G3DSA:2.60.120.460
- PIRSF:   PIRSF004681
- TIGRFAMs:   TIGR00149

Pfam domain/function: PF01894 UPF0047; SSF111038 UPF0047

EC number: NA

Molecular weight: Translated: 15656; Mature: 15656

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHH
HDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
HHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEECCCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEECCC
>Mature Secondary Structure
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVR
CCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHH
HDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLG
HHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEECCCCCCEEEEC
EHRIHGGSRRIIATLQGE
CEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796