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The map label for this gene is yihI [H]

Identifier: 209399376

GI number: 209399376

Start: 4950415

End: 4950921

Strand: Direct

Name: yihI [H]

Synonym: ECH74115_5311

Alternate gene names: 209399376

Gene position: 4950415-4950921 (Clockwise)

Preceding gene: 209400301

Following gene: 209396387

Centisome position: 88.84

GC content: 52.66

Gene sequence:

>507_bases
ATGAAACCATCTTCACCATCACGCAGCAAAGGTCATGCAAAAGCGCGTCGCAAAACGCGCGAAGAGCTGAATCAGGAAGC
TCGTGACCGCAAGCGTCAGAAAAAACGTCGTGGTCATGCGCCGGGCAGCCGCGCAGCGGGCGGAAACAACACGTCAGGCA
GCAAAGGCCAGAACGCACCGAAAGATCCACGTATTGGCAGTAAAACCCCTATTCCATTGGGCGTGACTGAAAAAGTCACC
AAACAGCACAAACCGAAGAGTGAGAAACCTATGCTTTCACCGCAGGCGGAGTTGGAATTACTAGAAACGGATGAGCGTCT
GGATGCGCTGCTGGAACGTCTGGAAGCAGGCGAAACCCTGAGTGCCGAAGAGCAATCCTGGGTGGATGCTAAACTGGATC
GTATTGATGAGTTGATGCAGAAACTCGGCCTCTCTTATGACGATGACGAAGAAGAGGAAGAAGACGAGAAGCAAGAAGAC
ATGATGCGTCTGCTGCGGGGCAACTAA

Upstream 100 bases:

>100_bases
AAAGGCGACAGAGTAATCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGTTAGATTCCGCCGCAAATCTATACTGAATAAAA
CGGCTAAAAGACGAACCATT

Downstream 100 bases:

>100_bases
CGGATTGCCGCCGTGGGCCTTCCCGTTCTGCTGATAACCCTTCCGGTTATATGTTATCTGGTGTGGTTATTCGTTAAACT
ACAGCGGTTGTCGCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNNTSGSKGQNAPKDPRIGSKTPIPLGVTEKVT
KQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQED
MMRLLRGN

Sequences:

>Translated_168_residues
MKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNNTSGSKGQNAPKDPRIGSKTPIPLGVTEKVT
KQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQED
MMRLLRGN
>Mature_168_residues
MKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNNTSGSKGQNAPKDPRIGSKTPIPLGVTEKVT
KQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQED
MMRLLRGN

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=169, Percent_Identity=97.6331360946746, Blast_Score=270, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 18967; Mature: 18967

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNNTSGSKGQNAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETL
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPSSPSRSKGHAKARRKTREELNQEARDRKRQKKRRGHAPGSRAAGGNNTSGSKGQNAP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
KDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETL
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA