| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209399284
Identifier: 209399284
GI number: 209399284
Start: 2516655
End: 2517839
Strand: Reverse
Name: 209399284
Synonym: ECH74115_2675
Alternate gene names: NA
Gene position: 2517839-2516655 (Counterclockwise)
Preceding gene: 209397386
Following gene: 209399311
Centisome position: 45.19
GC content: 53.16
Gene sequence:
>1185_bases ATGAGTGAAACTCGTTTTCATGGTGCCCGTGTTACGGAAAGTACCGACCTGGTAACAGCGATTAATGATGTTGATTCCAG TGTTATCGGTATCGTGGCAACGGCAGATGATGCGGACGCGGAGCTGTTCCCGCTGAACAAGCCCACACTGCTGACCCGCG TCAATGACGTGCTGGGAAAATGCGGGACTACGGGGACGCTTTATCGTGCGCTTAAGGCTATCGCAGACCAGGTGAGCACA AAAGTGATCGTCGTTCGCGTGGCTGAACACAAAGAAGAAGGCGGTAAGACGCAGGATCAACTGGTTATCGGTGGTTCTGA ATCTGACGGCAGCTATACGGGGATGTATGCGCTGCTTGTTGCAGAGCAGGATGAAAGCATCGGATACCGTCCGCGTATTC TGGCCGCGCCGGAGCTGGACACGGAGGCGGTAACAAAATCCCTGTGCGTGATTGCGGGTAAACTGCGCGCGTTTGTGTAT GCCACATGTCATGGTTGTAACACGATGGCTGAGGCGATTACCTACCGCCAGAAATTCAACGAACGTGAGGTGATGCTCTT ATGGCCTGACTTCATCGCCTACAACCTGAAAAGTGGCAAAAACGAAACGTTCCCCGCGCCTGCTTATGCGTGCGGCCTTC GTGCGTACATTGACCATGAGCAGGGCTGGCACAAATCGCTGTCCAACGTTCCGGTTAAAAATGTGCTTGGGATGTCGAGG CATGTGTTCTGGTCGTTGCAGGCCGAAGACAGTGATGCCAACAGCCTCAACAACAAAGAAATCACGACCATTATTCGTCG CAACGGGTTCCGCTTCTGGGGCAACCGCACACCGGAAACGAACGCCTACATCTTTGAGGTGTATACCCGAACCGCACAGG TGCTGGCTGATTCAATTGCGGAAGCGCAGTTTGAAACCATCGACAGTCCACTGACACCTGCGAACGTGAAGGATGTTATC AGTGCCATCAGGGCAAAACTGGATTCACTGGTTACTGCCGGGAAACTGATTGGCGCGGAGTGCTGGTATGACATCGAGGA TAACAGCACCACGAATTTACGTCAGGGGCGTGTGCGTATTCGCTACAAATATACGCCCGTTCCTCCGCTGGAAGACATGG AGCTTTACCAGTCGTTTACTGATGAATTCTTTGGTCCCGCATTTGCGGTGCTGGGAGGTGCCTGA
Upstream 100 bases:
>100_bases TGTTGTCGCCGTGGCGGGAGAACGGCGCAGGGGTGAGATTACGCGCGTGGTGGGTGATGATTGTTGCCGAATCATTTAAC GGATACAAGGGGCTGAAGCT
Downstream 100 bases:
>100_bases TGGCTGTACCAAAACATCTTCGCTTTTTTACGCTGTTTGTGGATGGTGAAAACGAAGTGGGTAAGGTGACGTCCGTCACC CTGCCTAAACTGACGCGCAA
Product: phage tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Pyocin R2_PP Tail Sheath Protein; Phage Tail Sheath-Like Protein; Tail Sheath Protein Bacteriophage; Prophage; Bacteriophage Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Phage-Related Tail Protein; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Phage Tail Sheath Protein FI-Like Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Phage TAIL SHEATH PROTEIN
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVST KVIVVRVAEHKEEGGKTQDQLVIGGSESDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVY ATCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNLKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSR HVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVI SAIRAKLDSLVTAGKLIGAECWYDIEDNSTTNLRQGRVRIRYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA
Sequences:
>Translated_394_residues MSETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVST KVIVVRVAEHKEEGGKTQDQLVIGGSESDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVY ATCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNLKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSR HVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVI SAIRAKLDSLVTAGKLIGAECWYDIEDNSTTNLRQGRVRIRYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA >Mature_393_residues SETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTK VIVVRVAEHKEEGGKTQDQLVIGGSESDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVYA TCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNLKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSRH VFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVIS AIRAKLDSLVTAGKLIGAECWYDIEDNSTTNLRQGRVRIRYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43508; Mature: 43376
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGK CCCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHC CGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEGGKTQDQLVIGGSESDGSYTGMYALLV CCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEE AEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVYATCHGCNTMAEAITYRQKFN EECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCC EREVMLLWPDFIAYNLKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSR CCEEEEECCHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCE HVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIA EEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH EAQFETIDSPLTPANVKDVISAIRAKLDSLVTAGKLIGAECWYDIEDNSTTNLRQGRVRI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCEEEE RYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA EEEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure SETRFHGARVTESTDLVTAINDVDSSVIGIVATADDADAELFPLNKPTLLTRVNDVLGK CCCCCCCCCCCCCCCCEEEHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHHHHHHHHC CGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEGGKTQDQLVIGGSESDGSYTGMYALLV CCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEE AEQDESIGYRPRILAAPELDTEAVTKSLCVIAGKLRAFVYATCHGCNTMAEAITYRQKFN EECCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCC EREVMLLWPDFIAYNLKSGKNETFPAPAYACGLRAYIDHEQGWHKSLSNVPVKNVLGMSR CCEEEEECCHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHCCCE HVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNRTPETNAYIFEVYTRTAQVLADSIA EEEEEEECCCCCCCCCCCHHHHHHHHHCCEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH EAQFETIDSPLTPANVKDVISAIRAKLDSLVTAGKLIGAECWYDIEDNSTTNLRQGRVRI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCEEEE RYKYTPVPPLEDMELYQSFTDEFFGPAFAVLGGA EEEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA