Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 209399235

GI number: 209399235

Start: 3006980

End: 3007378

Strand: Direct

Name: yohJ [C]

Synonym: ECH74115_3273

Alternate gene names: 209399235

Gene position: 3006980-3007378 (Clockwise)

Preceding gene: 209398611

Following gene: 209399430

Centisome position: 53.97

GC content: 49.37

Gene sequence:

>399_bases
ATGAGTAAGACACTGAACATTATCTGGCAATATTTACGCGCTTTCGTCCTGATTTATGCCTGCCTGTATGCAGGCATTTT
CATTGCTTCCCTGCTACCGGTAACCATTCCGGGCAGCATCATCGGGATGCTGATCCTGTTTGTCCTGCTGGCCTTGCAAA
TTCTTCCGGCGAAATGGGTCAATCCGGGGTGCTACGTACTGATTCGCTATATGGCGCTATTGTTTGTGCCGATTGGCGTA
GGCGTCATGCAATATTTTGATTTGCTCCGCGCACAGTTTGGCCCGGTAGTGGTTTCCTGTGCAATCAGTACGCTGGTGGT
TTTTCTGGTGGTGAGCTGGAGTTCGCAACTGGTACACGGTGAACGTAAAGTCGTAGGTCAGAAAGGATCAGAAGAATGA

Upstream 100 bases:

>100_bases
CCTCCCTAAAATTCAACTATGCTGAGAATTCTTAATGTGATCGGTAGCTCGTTTTACGAATTAATTGTATGATGAATCCA
TCTCATCTGGGGTGTTGATT

Downstream 100 bases:

>100_bases
TGGCGAATATCTGGTGGTCATTACCGCTGACGTTGATTGTCTTTTTTGCCGCCCGCAAACTGGCGGCACGGTATAAGTTT
CCCCTGCTTAACCCGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGV
GVMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHGERKVVGQKGSEE

Sequences:

>Translated_132_residues
MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGV
GVMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHGERKVVGQKGSEE
>Mature_131_residues
SKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVG
VMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHGERKVVGQKGSEE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=132, Percent_Identity=99.2424242424242, Blast_Score=260, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 14593; Mature: 14462

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVVGQKGSEE
HHHHHCCCCCCC
>Mature Secondary Structure 
SKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGMLILFVLLALQILPAKWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
NPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAISTLVVFLVVSWSSQLVHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERKVVGQKGSEE
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA