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The map label for this gene is ygcE [H]

Identifier: 209399162

GI number: 209399162

Start: 3726410

End: 3727888

Strand: Direct

Name: ygcE [H]

Synonym: ECH74115_4032

Alternate gene names: 209399162

Gene position: 3726410-3727888 (Clockwise)

Preceding gene: 209400723

Following gene: 209398290

Centisome position: 66.88

GC content: 49.49

Gene sequence:

>1479_bases
ATGTCGAAGAAATACATCATAGGGATTGATGGCGGAAGTCAGAGCACAAAAGTGGTGATGTACGATCTGGAAGGTAACGT
GGTTTGCGAAGGCAAAGGTTTATTGCAGCCGATGCACACGCCAGATGCCGATACCGCAGAACATCCTGACGACGATTTAT
GGGCATCATTATGTTTTGCCGGTCACGATTTGATGAGTCAGTTTGCCGGGAATAAAGAAGATATTGTCGGTATTGGTCTG
GGATCCATCCGTTGCTGCCGTGCGTTATTGAAAGCCGATGGCACGCCTGCTGCGCCGTTGATTAGCTGGCAGGATGCACG
CGTAACGCGTCCCTACGAACACACTAATCCTGACGTGGCCTATGTCACCTCTTTTTCGGGTTATCTGACGCATCGCTTAA
CCGGCGAGTTTAAAGACAATATCGCCAACTATTTTGGTCAGTGGCCGGTGGATTATAAGAGCTGGGCATGGAGCGAAGAT
GCTGCGGTAATGGAGAAGTTTAATATCCCCCGTCATATGCTGTTTGATGTGCAAATGCCAGGCACTGTTCTTGGACAGAT
CACACCACAAGCCGCGCTGGCGACACATTTCCCGGCAGGGCTGCCGGTTGTTTGTACCACCAGTGATAAACCGGTAGAAG
CTCTGGGAGCCGGATTACTGGATGATGAAACGGCGGTGATTTCACTCGGTACTTATATCGCGCTGATGATGAACGGCAAA
GCCTTGCCGAAAGATCCGGTGGCGTACTGGCCGATTATGTCTTCTATTCCGCAAACATTGCTGTATGAAGGTTACGGTAT
TCGCAAAGGCATGTGGACGGTGAGCTGGCTGCGCGACATGTTAGGCGAGTCGTTAATTCAGGATGCCAGGGCGCAGGATC
TTTCACCGGAAGATTTACTCAACAAAAAAGCTTCTTGTGTGCCACCTGGCTGTAATGGGCTGATGACGGTGCTGGACTGG
CTGACCAATCCGTGGGAACCGTACAAACGCGGGATTATGATCGGCTTTGATTCCAGCATGGATTACGCATGGATATATCG
TTCGATACTGGAAAGCGTGGCGCTGACGCTGAAGAACAATTACGACAATATGTGTAATGAAATGAATCACTTTGCGAAGC
ATGTGATCATTACTGGTGGCGGTTCGAACAGCGATCTGTTTATGCAGATTTTTGCCGACGTGTTCAACCTTCCGGCACGA
CGTAACGCCATTAACGGTTGTGCAAGTCTGGGGGCAGCGATCAATACGGCGGTAGGTCTGGGGCTATACCCGGATTACGC
AACGGCTGTCGACAAAATGGTTCGCGTGAAAGATATCTTTATACCGATTGAGAGCAATGCCAAACGCTACGACGCGATGA
ATAAAGGTATTTTCAAAGCCCTAACCAAACATACTGATGTGATCCTGAAAAAATCGTATGAAGTGATGCATGGGGAATTG
GGGAATGCGGATTCGATCCAGAGCTGGTCGAATGCGTAA

Upstream 100 bases:

>100_bases
TTGTCTTTACCTTTTTGCTGTTCCAAAAAATTCGTACTGCTGATAGCGCCCCCGCAATGGCCAGCAGCAAGTAAGCCAGG
AAAATTACAGGAGAAAAATC

Downstream 100 bases:

>100_bases
GTGAGGAAGACCGGGCGGGAAACTGCCCGGCCTGAACATACCTGAATGGTTATCCCCGCTGGCGCGGGGAACATAAGTTC
GACAACTTAAAAAATGATAA

Product: carbohydrate kinase, FGGY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGL
GSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED
AAVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK
ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDW
LTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPAR
RNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGEL
GNADSIQSWSNA

Sequences:

>Translated_492_residues
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGL
GSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSED
AAVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK
ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDW
LTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPAR
RNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGEL
GNADSIQSWSNA
>Mature_491_residues
SKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLG
SIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDA
AVMEKFNIPRHMLFDVQMPGTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKA
LPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWL
TNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARR
NAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGELG
NADSIQSWSNA

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789138, Length=492, Percent_Identity=98.9837398373984, Blast_Score=1014, Evalue=0.0,
Organism=Escherichia coli, GI1787789, Length=487, Percent_Identity=24.0246406570842, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790361, Length=507, Percent_Identity=22.0907297830375, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1789168, Length=323, Percent_Identity=24.7678018575851, Blast_Score=72, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: NA

Molecular weight: Translated: 54124; Mature: 53993

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFA
CCCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVA
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEE
YVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMP
EEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCC
GTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK
CHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCCEEEHHHHHHHEECCC
ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNN
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
YDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGL
HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGEL
CCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNADSIQSWSNA
CCCCCCCCCCCC
>Mature Secondary Structure 
SKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFA
CCCEEEEECCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
GHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVA
HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCEE
YVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMP
EEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCC
GTVLGQITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGK
CHHHHCCCCHHHHHHCCCCCCCEEEECCCCCHHHHCCCCCCCCCCEEEHHHHHHHEECCC
ALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
NKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNN
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
YDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGL
HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
GLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKALTKHTDVILKKSYEVMHGEL
CCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GNADSIQSWSNA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]