| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ftnB [H]
Identifier: 209398984
GI number: 209398984
Start: 2494371
End: 2494874
Strand: Direct
Name: ftnB [H]
Synonym: ECH74115_2638
Alternate gene names: 209398984
Gene position: 2494371-2494874 (Clockwise)
Preceding gene: 209400371
Following gene: 209397192
Centisome position: 44.77
GC content: 48.02
Gene sequence:
>504_bases ATGGCAACCGCTGGAATGCTTCTCAAACTCAACTCTCAATTGAACCGCGAGTTTTACGCATCCAATCTCTACCTTCACCT GAGTAACTGGTGTTCTGAACAGAGTCTGAACGGCACCGCCACTTTCCTTCGCGCCCAGGCACAGAGTAATGTGACCCAAA TGATGCGCATGTTTAACTTTATGAAGAGTGTCGGCGCTACCCCCATCGTTAAAGCCATTGATGTTCCCGGTGAAAAACTG AACTCTCTGGAAGAACTGTTCCAAAAAACGATGGAAGAATACGAGCAACGTTCTAGTACGTTGGCACAGTTAGCCGATGA AGCGAAAGAACTGAATGATGATTCAACCGTCAATTTCCTGCGCGATCTGGAAAAAGAACAGCAGCATGATGGCCTGTTGC TGCAAACCATTCTTGATGAAGTGCGCAGTGCGAAACTTGCGGGTATGTGCCCAGTGCAGACCGACCAACATGTTCTGAAT GTCGTGTCGCATCAGCTGCATTGA
Upstream 100 bases:
>100_bases CACATTTCGGACCGGCAGAAAGGAATTATTCTGCAAACAGTAATTATGGTGTTTTGATTTATCTTGCACCTCTCCACTTC TGGATATAAGGATATTAGGT
Downstream 100 bases:
>100_bases TCATACATCGACGCTAATGCATTGCACCGATGAAGTTTTTGAGAAACCGCTGCCTCATCTTTTTTGAAGCAGCGGTTTTT TAATGGGATTCGCCTTGTGG
Product: ferritin family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MATAGMLLKLNSQLNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKL NSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN VVSHQLH
Sequences:
>Translated_167_residues MATAGMLLKLNSQLNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKL NSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN VVSHQLH >Mature_166_residues ATAGMLLKLNSQLNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLN SLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNV VSHQLH
Specific function: Unknown
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788212, Length=167, Percent_Identity=99.4011976047904, Blast_Score=345, Evalue=8e-97, Organism=Escherichia coli, GI1788216, Length=148, Percent_Identity=35.1351351351351, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18877; Mature: 18745
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAGMLLKLNSQLNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFL HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure ATAGMLLKLNSQLNREFYASNLYLHLSNWCSEQSLNGTATFLRAQAQSNVTQMMRMFNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLAQLADEAKELNDDSTVNFL HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLNVVSHQLH HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]