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The map label for this gene is alpA [C]

Identifier: 209398703

GI number: 209398703

Start: 322069

End: 322329

Strand: Direct

Name: alpA [C]

Synonym: ECH74115_0316

Alternate gene names: 209398703

Gene position: 322069-322329 (Clockwise)

Preceding gene: 209398628

Following gene: 209398262

Centisome position: 5.78

GC content: 56.32

Gene sequence:

>261_bases
ATGCGTAATATTTCTGTGTCTGCGCCAGCTCCTGCTGCGCCATTATTTCCTGTATCGAACCATCATGAGCGATTTTTACG
CCTGCCTGAGGTGATGCACTTATGCGGGTTGTCCCGTTCGACCGTTTACGACCTGATCAGCCGCGATGCGTTTCCGAAGC
AGATCCCGCTTGGCGGTAAAAATGTCGCCTGGGCACAGTCTGAGGTCAGCGCATGGATGGCGGACCGCATCAGCGCCCGT
GGGCGGGGATGTGATGCATGA

Upstream 100 bases:

>100_bases
AAAAATGCGTGCGCAGGTGGTTTATATACACATAATAAGGAACTACCTGAACCCGGATAAATTCATCCGGACTGTTGTGG
AAATTAAAGAGGGTAGATAA

Downstream 100 bases:

>100_bases
TGATACCTGCATACATTAAATACCTTTATTCTGGCTTGCTTACTGTCGTCATTTCCAGGTATAGTTTTTCCGCTGTCGCA
AAATCGGCAGCCGGAATTGG

Product: phage DNA binding protein

Products: NA

Alternate protein names: Phage Transcriptional Regulator AlpA-Family; Prophage Regulatory Protein; Prophage CP4-57 Regulatory

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRNISVSAPAPAAPLFPVSNHHERFLRLPEVMHLCGLSRSTVYDLISRDAFPKQIPLGGKNVAWAQSEVSAWMADRISAR
GRGCDA

Sequences:

>Translated_86_residues
MRNISVSAPAPAAPLFPVSNHHERFLRLPEVMHLCGLSRSTVYDLISRDAFPKQIPLGGKNVAWAQSEVSAWMADRISAR
GRGCDA
>Mature_86_residues
MRNISVSAPAPAAPLFPVSNHHERFLRLPEVMHLCGLSRSTVYDLISRDAFPKQIPLGGKNVAWAQSEVSAWMADRISAR
GRGCDA

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9430; Mature: 9430

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNISVSAPAPAAPLFPVSNHHERFLRLPEVMHLCGLSRSTVYDLISRDAFPKQIPLGGK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
NVAWAQSEVSAWMADRISARGRGCDA
CCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRNISVSAPAPAAPLFPVSNHHERFLRLPEVMHLCGLSRSTVYDLISRDAFPKQIPLGGK
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
NVAWAQSEVSAWMADRISARGRGCDA
CCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA