| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ybhM [H]
Identifier: 209398696
GI number: 209398696
Start: 946525
End: 947238
Strand: Direct
Name: ybhM [H]
Synonym: ECH74115_0935
Alternate gene names: 209398696
Gene position: 946525-947238 (Clockwise)
Preceding gene: 209400563
Following gene: 209397275
Centisome position: 16.99
GC content: 42.3
Gene sequence:
>714_bases ATGGAATCATACTTGCAAAACAGCAATAAATTAGATTTTCAGCACGAGACCAGGATATTAAACGGTATATGGCTCATTAC CGCTTTAGGTTTGGTGGCAACCGCAGGGCTGGCCTGGGGGGCTAAGTATCTCGAAATTACGGCAACCAAATATGATTCAC CACCAATGTATGTCGCCATAGGGTTATTATTACTTTGTATGTATGGCTTAATTAAGGATATCAACAAGATAAATGCCGCC ATCGCAGGCGTAATATATCTGTTTTTACTCTCTTTGGTGGCGATTGTCGTTGCAAGTTTAGTTCCTGTATATGCCATTAT CGTCGTGTTCAGCACTGCGGGCGCGATGTTTTTAATCAGTATGCTGGCCGGTTTATTATTTAATATTGATCCTGGTTCTC ACCGTTTTATGATTATGATGACGTTGACAGGGTTGGCCCTGGTAATCATCGTGAATGCCGCATTAATGAGTGAACGGCCC ATTTGGGTAATAAGTTGCTTAATGATTGTGTTATGGTCAGGCATTATCTTGCATGGACGAAATAAGCTCCTTGAATTGGC GGGGAAATGCCATAGTGAAGAGTTGTGGAGTCCGGTTCGTTGCGCTTTTACAGGTGCATTAACACTCTATTACTATTTTA TCGGCTTCTTTGGGATACTTGCCGCGATAGCTATAACGCTTGTCTGGCAAAGGCATACGCGTTTTTTTCATTAG
Upstream 100 bases:
>100_bases AGAGTTTTCCGTATCCATAAATACAAAAGTATTTTGTATGCGTGGGTTTAAATTTATTCATGATGAATATTAATATTTTT CTATAAGGACAACTAAAAGA
Downstream 100 bases:
>100_bases TCGTAAATGCACATACTAAAGAACTTAACTAAACTTCACATCGCCGCTTCATTTTTCGCCCGTAGCTTCTTCGCCTGGCT TTCCAGCAACAGGTAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MESYLQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPPMYVAIGLLLLCMYGLIKDINKINAA IAGVIYLFLLSLVAIVVASLVPVYAIIVVFSTAGAMFLISMLAGLLFNIDPGSHRFMIMMTLTGLALVIIVNAALMSERP IWVISCLMIVLWSGIILHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH
Sequences:
>Translated_237_residues MESYLQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPPMYVAIGLLLLCMYGLIKDINKINAA IAGVIYLFLLSLVAIVVASLVPVYAIIVVFSTAGAMFLISMLAGLLFNIDPGSHRFMIMMTLTGLALVIIVNAALMSERP IWVISCLMIVLWSGIILHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH >Mature_237_residues MESYLQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPPMYVAIGLLLLCMYGLIKDINKINAA IAGVIYLFLLSLVAIVVASLVPVYAIIVVFSTAGAMFLISMLAGLLFNIDPGSHRFMIMMTLTGLALVIIVNAALMSERP IWVISCLMIVLWSGIILHGRNKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH
Specific function: Unknown
COG id: COG0670
COG function: function code R; Integral membrane protein, interacts with FtsH
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787005, Length=237, Percent_Identity=96.2025316455696, Blast_Score=462, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006214 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26236; Mature: 26236
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESYLQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPPMYVAI CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCHHHHHH GLLLLCMYGLIKDINKINAAIAGVIYLFLLSLVAIVVASLVPVYAIIVVFSTAGAMFLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAGLLFNIDPGSHRFMIMMTLTGLALVIIVNAALMSERPIWVISCLMIVLWSGIILHGR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCH NKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH HHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESYLQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYLEITATKYDSPPMYVAI CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCCCCHHHHHH GLLLLCMYGLIKDINKINAAIAGVIYLFLLSLVAIVVASLVPVYAIIVVFSTAGAMFLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLAGLLFNIDPGSHRFMIMMTLTGLALVIIVNAALMSERPIWVISCLMIVLWSGIILHGR HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCH NKLLELAGKCHSEELWSPVRCAFTGALTLYYYFIGFFGILAAIAITLVWQRHTRFFH HHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]