| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ispH [H]
Identifier: 209398644
GI number: 209398644
Start: 30652
End: 31602
Strand: Direct
Name: ispH [H]
Synonym: ECH74115_0031
Alternate gene names: 209398644
Gene position: 30652-31602 (Clockwise)
Preceding gene: 209399254
Following gene: 209400346
Centisome position: 0.55
GC content: 55.21
Gene sequence:
>951_bases ATGCAGATCCTGTTGGCCAACCCACGTGGTTTTTGTGCCGGGGTAGACCGCGCTATCAGCATTGTTGAAAACGCGCTTGC CATTTACGGCGCACCGATATATGTCCGTCACGAAGTGGTGCATAACCGCTACGTGGTCGATAGCCTGCGCGAGCGTGGAG CTATCTTTATTGAGCAGATCAGCGAAGTGCCGGACGGCGCGATCCTGATCTTCTCCGCACATGGTGTTTCTCAGGCGGTA CGTAACGAAGCGAAAAGCCGTGATTTGACGGTATTCGACGCCACCTGTCCGCTGGTGACCAAAGTGCATATGGAAGTCGC CCGCGCCAGCCGTCGTGGCGAAGAGTCTATTCTCATCGGTCACGCCGGGCACCCGGAAGTGGAAGGGACGATGGGGCAGT ACAGCAACCCTGAAGGGGGAATGTATCTGGTCGAATCGCCTGACGATGTGTGGAAACTGACGGTCAAAAACGAAGAGAAG CTCTCCTTTATGACCCAAACCACGCTGTCGGTAGATGACACGTCTGATGTGATCGACGCGCTGCGTAAACGCTTCCCGAA AATTGTCGGTCCGCGCAAAGATGACATCTGCTACGCCACGACTAACCGTCAGGAAGCGGTACGCGCCCTGGCAGAACAGG CGGAAGTTGTGTTGGTGGTCGGTTCGAAAAACTCCTCCAACTCCAACCGTCTGGCGGAGCTGGCCCAGCGTATGGGCAAA CGCGCGTTTTTGATTGACGATGCGAAAGATATCCAGGAAGAGTGGGTGAAAGAGGTTAAATGCGTCGGCGTGACTGCGGG CGCATCGGCTCCGGATATTCTGGTGCAGAATGTGGTGGCACGTTTGCAGCAGCTGGGTGGTGGTGAAGCCATTCCGCTGG AAGGCCGTGAAGAAAATATTGTTTTCGAAGTGCCGAAAGAGCTGCGTGTCGATATTCGTGAAGTCGATTAA
Upstream 100 bases:
>100_bases GGCGACTCCATTACCGTCGATTTCAACCATCCGCTGGCCGGGCAGACCGTTCATTTTGATATTGAAGTGCTGGAAATCGA TCCGGCACTGGAGGCGTAAC
Downstream 100 bases:
>100_bases GTCATTAGCAGCCTAAGTTATGCGAAAATGCCGGTCTTGTTATCGGCATTTTTTATGGAGAAAACATGCGCTTACCTATC TTCCTCGATACTGACCCCGG
Product: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK RAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
Sequences:
>Translated_316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK RAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD >Mature_316_residues MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAV RNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK RAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]
COG id: COG0761
COG function: function code IM; Penicillin tolerance protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispH family [H]
Homologues:
Organism=Escherichia coli, GI1786212, Length=316, Percent_Identity=100, Blast_Score=645, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003451 [H]
Pfam domain/function: PF02401 LYTB [H]
EC number: =1.17.1.2 [H]
Molecular weight: Translated: 34775; Mature: 34775
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHH SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEHEEECCCCHHHHHHH LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC RAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENI EEEEECCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCE VFEVPKELRVDIREVD EEECCHHHCCHHHCCC >Mature Secondary Structure MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQI CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHH SEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIG HHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEE HAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDA CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEHEEECCCCHHHHHHH LRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGK HHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCC RAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENI EEEEECCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCE VFEVPKELRVDIREVD EEECCHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA