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The map label for this gene is yhgF [H]

Identifier: 209398543

GI number: 209398543

Start: 4352659

End: 4354980

Strand: Direct

Name: yhgF [H]

Synonym: ECH74115_4713

Alternate gene names: 209398543

Gene position: 4352659-4354980 (Clockwise)

Preceding gene: 209400461

Following gene: 209399325

Centisome position: 78.12

GC content: 56.93

Gene sequence:

>2322_bases
ATGATGAATGATTCGTTCTGCCGCATTATTGCGGGTGAAATTCAGGCGCGCCCGGAACAGGTTGACGCTGCCGTTCGCCT
GCTTGACGAAGGGAATACCGTGCCTTTTATTGCACGTTATCGTAAGGAAATCACCGGCGGTCTGGATGACACGCAGCTGC
GTAATCTGGAAACGCGTCTGGGATACCTGCGCGAGCTGGAAGAGAGACGTCAGGCGATCCTCAAGTCCATTTCCGAGCAA
GGCAAACTCACCGATGATCTGGCGAATGCCATCAACGCCACCCTAAGCAAAACCGAACTCGAAGACCTCTACCTGCCCTA
CAAACCTAAACGCCGCACCCGCGGGCAAATCGCCATTGAAGCAGGGCTTGAGCCGTTGGCTGACCTGCTGTGGAGCGATC
CGTCACACACGCCAGAAGTCGCCGCTGCGCAATATATTGATGCCGATAAAGGCGTGGCAGATACCAAAGCCGCGCTGGAC
GGCGCGCGCTATATCCTGATGGAACGGTTTGCCGAAGATGCCGCGCTGCTGGCGAAAGTGCGTGATTATCTGTGGAAGAA
CGCGCATTTGGTTTCTACGGTGGTGAGCGGTAAAGAAGAGGAAGGGGCGAAATTCCGCGACTATTTCGATCATCACGAAC
CGTTGTCCACGGTGCCTTCTCACCGCGCGCTGGCGATGTTCCGTGGGCGTAACGAAGGCGTACTTCAGCTTTCGCTGAAT
GCCGATCCACAGTTCGATGAGCCGCCCAAAGAGAGCTATTGCGAGCAAATCATCACGGATCACCTTGGCCTGCGCCTGAA
CAATGCCCCGGCGGATAGCTGGCGCAAAGGCGTGGTGAGCTGGACGTGGCGCATCAAGGTGCTGATGCATCTGGAAACCG
AACTGATGGGCACCGTGCGCGAACGTGCGGAAAATGAAGCAATCAACGTCTTTGCCCGTAACCTGCACGATCTGCTGATG
GCTGCCCCTGCCGGACTGCGTGCAACGATGGGCCTCGATCCGGGTCTGCGTACCGGGGTAAAAGTGGCGGTGGTCGATGC
CACTGGCAAACTGGTAGCGACCGATACCATTTACCCGCACACCGGACAAGCCGCAAAAGCAGCGATGACTGTTGCTGCGC
TGTGTGAAAAGCATAACGTTGAACTGGTGGCGATCGGCAACGGTACAGCTTCCCGCGAAACCGAACGTTTCTATCTCGAC
GTGCAGAAGCAGTTCCCGAAAGTGACCGCACAGAAAGTGATCGTCAGCGAAGCTGGCGCGTCGGTTTACTCGGCTTCCGA
GCTGGCAGCGCAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTTTCTATCGCCCGCCGTTTGCAGGATCCGC
TGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCC
CGCAAACTGGATGCAGTAGTAGAAGACTGCGTAAACGCCGTTGGCGTCGATCTCAACACCGCTTCTGTTCCGCTATTAAC
TCGCGTGGCGGGCCTGACGCGAATGATGGCGCAAAACATCGTGGCCTGGCGCGATGAGAACGGCCAGTTCCAGAACCGTC
AGCAACTGCTGAAAGTCAGCCGTCTGGGGCCGAAAGCCTTCGAGCAGTGCGCGGGCTTCCTGCGCATTAACCACGGTGAC
AACCCGCTGGACGCCTCTACCGTTCACCCGGAAGCCTATCCGGTGGTGGAACGCATTCTGGCAGCAACACAGCAGGCACT
GAAAGATCTGATGGGTAACAGCAGCGAACTGCGTAACCTGAAAGCGTCTGACTTTACTGATGAAAAATTCGGTGTGCCGA
CAGTAACTGACATCATCAAAGAGCTGGAAAAACCGGGTCGCGATCCGCGTCCGGAATTTAAAACCGCTCAGTTTGCCGAT
GGCGTCGAGACAATGAACGACCTGCAACCGGGTATGATCCTCGAAGGCGCTGTCACCAACGTCACCAACTTTGGCGCGTT
TGTCGATATCGGCGTGCATCAGGACGGCCTGGTTCACATCTCTTCATTGTCGAACAAGTTTGTGGAAGATCCGCATACCG
TGGTGAAAGCGGGCGACATTGTGAAGGTGAAAGTGCTGGAAGTGGATCTTCAGCGTAAACGTATCGCCCTGACTATGCGT
CTGGACGAGCAGCCTGGCGAAACCAACTCTCGTCGCGGCGGCGGTAACGATCGCCCGCAAAACAACCGCCCGGCAGCCAA
ACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAACAGCGCGATGATGGACGCGCTGGCGGCAGCAATGGGCAAAAAACGTT
AA

Upstream 100 bases:

>100_bases
GTAAGGAAGAGTCTTAACCTCCTGCCGATGGCTGGCATTTTTGCCAGCCAGTCCGTATAACTATCCCCTGATTTTTGATC
CGAAAAGATGAACTCAAACC

Downstream 100 bases:

>100_bases
ACGCCCGGACTGGCCCCTAAACCTGCGCGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAG
TGCCGGAGAATATCTCCGGC

Product: putative transcriptional accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEERRQAILKSISEQ
GKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAENEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR

Sequences:

>Translated_773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEERRQAILKSISEQ
GKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAENEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
>Mature_773_residues
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLGYLRELEERRQAILKSISEQ
GKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALD
GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
ADPQFDEPPKESYCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAENEAINVFARNLHDLLM
AAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD
VQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD
NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD
GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=801, Percent_Identity=34.4569288389513, Blast_Score=410, Evalue=1e-114,
Organism=Homo sapiens, GI27597090, Length=399, Percent_Identity=25.5639097744361, Blast_Score=96, Evalue=1e-19,
Organism=Escherichia coli, GI87082262, Length=773, Percent_Identity=98.9650711513583, Blast_Score=1574, Evalue=0.0,
Organism=Escherichia coli, GI1787140, Length=82, Percent_Identity=43.9024390243902, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17511129, Length=721, Percent_Identity=27.0457697642164, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17552892, Length=654, Percent_Identity=22.3241590214067, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=229, Percent_Identity=26.6375545851528, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI62484314, Length=774, Percent_Identity=31.7829457364341, Blast_Score=363, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24640080, Length=451, Percent_Identity=23.5033259423503, Blast_Score=97, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85014; Mature: 85014

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GYLRELEERRQAILKSISEQGKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCEEEEEEEEEHHHHHHHHHHHHH
ERAENEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
GYLRELEERRQAILKSISEQGKLTDDLANAINATLSKTELEDLYLPYKPKRRTRGQIAIE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
AGLEPLADLLWSDPSHTPEVAAAQYIDADKGVADTKAALDGARYILMERFAEDAALLAKV
CCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN
HHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCHHCCCCCHHHHHHCCCCCCEEEEEEC
ADPQFDEPPKESYCEQIITDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR
CCCCCCCCCHHHHHHHHHHHHHCCEECCCCCHHHHCCCEEEEEEEEEHHHHHHHHHHHHH
ERAENEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEECCCCCC
TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA
CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHEEEHHHHCCHHHHHHHHHHHCCC
SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL
HCCHHHHHHHHCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHHHH
VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR
HHHCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHEECCCEEEEEEEEEECCCCEEEEEEE
LDEQPGETNSRRGGGNDRPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]