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The map label for this gene is tfaQ [H]

Identifier: 209398519

GI number: 209398519

Start: 1589101

End: 1589682

Strand: Direct

Name: tfaQ [H]

Synonym: ECH74115_1644

Alternate gene names: 209398519

Gene position: 1589101-1589682 (Clockwise)

Preceding gene: 209400441

Following gene: 209400821

Centisome position: 28.52

GC content: 47.08

Gene sequence:

>582_bases
ATGGCATTCAGAATGAGTGAACAACCACGGACCATAAAAATTTATAATCTGCTGACCGGAACTAATGAATTTATTGGTGA
AGGTGACGCATATATTCCGCCTCATACAGGTCTGCCAGCAAACAGTACCTATATTGCACCGCCAGATATTCCGGCTGGCT
TCGTGGCTGTTTTCAACAGTGATGAGTCATCGTGGCATCTCGTTGAAGATCATCGGGGTAAAACGGTTTATGACGTGGCT
TCCGGCGACGCGTTATTTATTTCTGAACTCGGCTCATTACCGGAAAATGTTACCTGGTTATCGCCGGAAGGGGAGTTTCA
GAAGTGGAACGGCACAGCCTGGGTGAAAGATGCAGAAGCAGAAAAACTGTTCCGGATCCGGGAGGCGGAAGAAACAAAAA
ACAGCCTGATGCAGGTAGCCAGTGAGCATATTGCGCCACTTCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAA
ACCTCATTGCTGGAAGCCTGGAAAAAGTATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTG
GCCTGTAATACCTGAAGTTTAA

Upstream 100 bases:

>100_bases
CGATTGGCTCACATGGACACACCATCACCGTTAACGCTGCGGGTAACGCGGAAAACACTGTCAAAAACATCGCATTTAAC
TACATTGTGAGGCTTGCATA

Downstream 100 bases:

>100_bases
AATAAAAGCCCGCTTAAAATATCGCGGGCTTCGAAATATAAATGTATTTTCAGAGGCTAGAGCTTAGGATATCTCAGCGG
CAATTAACTTATGAGGGATA

Product: tail fiber assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MAFRMSEQPRTIKIYNLLTGTNEFIGEGDAYIPPHTGLPANSTYIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVA
SGDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEE
TSLLEAWKKYRVLLNRVDTSTAPDIEWPVIPEV

Sequences:

>Translated_193_residues
MAFRMSEQPRTIKIYNLLTGTNEFIGEGDAYIPPHTGLPANSTYIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVA
SGDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEE
TSLLEAWKKYRVLLNRVDTSTAPDIEWPVIPEV
>Mature_192_residues
AFRMSEQPRTIKIYNLLTGTNEFIGEGDAYIPPHTGLPANSTYIAPPDIPAGFVAVFNSDESSWHLVEDHRGKTVYDVAS
GDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDAEAEKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEET
SLLEAWKKYRVLLNRVDTSTAPDIEWPVIPEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI2367120, Length=191, Percent_Identity=94.7643979057592, Blast_Score=371, Evalue=1e-104,
Organism=Escherichia coli, GI1787637, Length=191, Percent_Identity=94.2408376963351, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI1787402, Length=184, Percent_Identity=35.8695652173913, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 21590; Mature: 21459

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRMSEQPRTIKIYNLLTGTNEFIGEGDAYIPPHTGLPANSTYIAPPDIPAGFVAVFNS
CCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECC
DESSWHLVEDHRGKTVYDVASGDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDAEA
CCCCEEEEECCCCCEEEEECCCCEEEHHHHCCCCCCCEEECCCCCCEECCCEEEEECCCH
EKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC
TAPDIEWPVIPEV
CCCCCCCCCCCCC
>Mature Secondary Structure 
AFRMSEQPRTIKIYNLLTGTNEFIGEGDAYIPPHTGLPANSTYIAPPDIPAGFVAVFNS
CCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECC
DESSWHLVEDHRGKTVYDVASGDALFISELGSLPENVTWLSPEGEFQKWNGTAWVKDAEA
CCCCEEEEECCCCCEEEEECCCCEEEHHHHCCCCCCCEEECCCCCCEECCCEEEEECCCH
EKLFRIREAEETKNSLMQVASEHIAPLQDAVDLEIATEEETSLLEAWKKYRVLLNRVDTS
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEEECCHHHHHHHHHHHHHHHHHHHCCC
TAPDIEWPVIPEV
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]