| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is uspB [H]
Identifier: 209398495
GI number: 209398495
Start: 4476774
End: 4477055
Strand: Reverse
Name: uspB [H]
Synonym: ECH74115_4840
Alternate gene names: 209398495
Gene position: 4477055-4476774 (Counterclockwise)
Preceding gene: 209397930
Following gene: 209396835
Centisome position: 80.35
GC content: 49.29
Gene sequence:
>282_bases ATGGCGCGCTATTTCTCATCACTACGCGCGTTGTTAGTGGTACTGCGTAACTGCGATCCATTGCTCTATCAATATGTTGA TGGAGGGGGCTTTTTTACCTCACATGGCCAACCCAACAAACAGGTGCGTCTCGTTTGGTATATCTATGCCCAACGTTATC GCGATCATCACGATGATGAGTTTATTCGCCGCTGTGAGCGGGTGCGTCGGCAGTTTATTCTGACCAGCGCATTGTGTGGT CTGGTGGTGGTCAGCCTGATTGCCTTGATGATTTGGCATTAA
Upstream 100 bases:
>100_bases GTAGCCCCGGGGTGGAACTCCGCGGGCAGGTCGCCGGGGAGGAGGTATGATAAGCACCGTCGCATTATTTTGGGCTTTAT GTGTCGTTTGCATTGTTAAC
Downstream 100 bases:
>100_bases GCACTTCAGCAATAATAACGCATAAAAAAAGCGGGCCAGTAAACTGACCCGCTCGTTTTGGTGCGTACTATTACAGGAAC TGCAAGGAGAGCCAGTAAAG
Product: universal stress protein UspB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCG LVVVSLIALMIWH
Sequences:
>Translated_93_residues MARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCG LVVVSLIALMIWH >Mature_92_residues ARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGL VVVSLIALMIWH
Specific function: Not Known. Overexpression Of Uspb Causes Cell Death In Stationary Phase, Whereas Mutants Of Uspb Are Sensitive To Exposure To Ethanol But Not Heat In Stationary Phase. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein B family [H]
Homologues:
Organism=Escherichia coli, GI1789908, Length=93, Percent_Identity=100, Blast_Score=194, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019598 [H]
Pfam domain/function: PF10625 UspB [H]
EC number: NA
Molecular weight: Translated: 11063; Mature: 10932
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDE CHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHH FIRRCERVRRQFILTSALCGLVVVSLIALMIWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARYFSSLRALLVVLRNCDPLLYQYVDGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDE HHHHHHHHHHHHHHHCCCHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCHH FIRRCERVRRQFILTSALCGLVVVSLIALMIWH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA